Gene detail

Detail information of GWHGAAEX000889/evm.TU.scaffold_102.10

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000108	482607	486891	-

Transcript Sequence
>GWHTAAEX000889 AATTTTTTTCTTAATTTATATTCTTTGTTTAATTACTATTTTAGGCGGTATATTTCTATGCTTTTATCTTTAAAAAAAGCAGTGTTGCATAGTCTTATATTTTGCACTCATGATGCACCAGCATGTTGAAATGTGCTTTTATATCTACATATATGTGCAAGGACTTGTTCGGTGCTTTAGACGTCCGCTTCTATTAAGTTACAAAAACATGAAAACTTTATTTTTGAAAGGGTCATTTTTTATTACCCTACCCTAGCATCATTACCAAGCTTTAATTCTGCATTTGGGTTGACTACATGAATATTTAGTTTTGTTGTAAGATTTCAATAACATTTAATTGTTTTAATGGATGCTCATTAAATCTAACCTTGATTCCCAAGATGTACTCTTGATCATCAATATACAAAGGTACATGTACTTGTATGCAGGATGAAGTGGAGAGGTATGTTAGAGCTTACATGTCCAAGTTGGTCAATCAAAACAAGGATTTTACCTACCTTTACTAGTTTTGATTGACCATGGGAGAGAAACTCTGCATTTCTTGGAAGGATTGCCAACTACTTGAAAGGGGGACTACTGCATTTCTTGGAAGGATTGCAAACTTTGGTTACATGGTTTTGAATCAGTTCATGGAGATAATCTTATTGATTCCTTATGATACCATAGTGAGGAAGAGAGATTGTATACTTCTAGCATGGTGGGGGTACATTTTTGGCCTTCCAACCTCAATTATCTGCGATATAGATTTTATAAAAGTTAATTTTGGAAGAGCTTGTTGAACATGATGGGCACACTACTCTCAAACATGACCCATTATTTCATCCTCATGTTGATGGTAGATTGAGGTGTTTAATTAATTGCGGTCTATTTACCAAGACGGCTCTACAACAAAAAGACAAGAACATGGGATGATAGTGTGTTCAACATCTTGTTTGGGCTATCAGTTCAATAGCCTGTTTGATATGTAGTTCTCGATTGATCTGAGTCGGTTGAATAAAGGCATTGATTAATTTGTTACATTTTCAGAGTCTGGAAGATCCTCTCATGCTGAAGAACAATTAATGAGGATGGATTATAAGTACAAGGCGCATTATGATAAATACAAAGTTGAGAGACTATTTGTGGTCAGTGACTTAGTTTTGTTAACAAATGTCGATTAAAGGGTGATCATCGGAAGTTGAATGGGCATTATTAAAAGATTAATTAATAATGCTTATTAGTTGGAGTTGTTGACCTATATGAGTTTGTACTCTGATAAATGTGGAAAACCTTATGATGGGCATGCCGTGAGGAACACATTTAGTTGAATTGCTCTCATTCTTTAGTGCCAACTCGGGGATCCAATAGAGATGCCCTTGTGACTCTAGACTCATTTTTTCTTAATAATGAAAGTGAAAGGTAACCCCAATGGATGGGGAGGATGAGCTTATGTTGTTAACCATGGATGTATACTTCAAGCTGGATGAGAAGTTGTCCAGGAATCAAGAGGAATGTGACGACGCCAACAGATTTGGTCGACCGCCTGATGGTGTTGCCGATAGGAATGTTGCTGATAGGAATGGCCCGATAGCTATTGATGATAGTAAAGATCCTCATCCTGCCATGGTGAACGATTTTGCCAAGGGGAACGGTTCTATCGACTCAACCACTATTGTTGGAGATTTTTTTTGA

Network for GWHGAAEX000889

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module9

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.050
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	0.150
	SRR5643514	five period of Gastrodia elata	0.290
	SRR5643515	five period of Gastrodia elata	0.230
	SRR5643524	five period of Gastrodia elata	0.520
	SRR5643525	five period of Gastrodia elata	0.190
	SRR5643528	five period of Gastrodia elata	0.050
	SRR5643658	five period of Gastrodia elata	0.110
	SRR5643659	five period of Gastrodia elata	1.030
	SRR5643660	five period of Gastrodia elata	1.120
	SRR5643661	five period of Gastrodia elata	2.410
	SRR5643662	five period of Gastrodia elata	0.730
	SRR5643663	five period of Gastrodia elata	0.920
	SRR5643664	five period of Gastrodia elata	0.520
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.540
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.790
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.690
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.490
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.290
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.560
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.250
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.910
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.400
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.670
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.670
SRP279888	Gastro	Gastrodia elata tuber	2.99
	Juven	Juvenile tuber	0.98
	Mother_Gastro	Mother tuber of Gastrodia elata	2.06
	Mother_Juven	Mother tuber of Juvenile	1.08