Detail information of GWHGAAEX000892/evm.TU.scaffold_102.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00481.00E-76Transcription factor, Myb superfamily
nrgi|255642827|gb|ACU22114.1|1.12E-83unknown [Glycine max]
Swissprottr|Q9M2Y9|RAX3_ARATH4.00E-77Transcription factor RAX3
trEMBLtr|C6TIC2|C6TIC2_SOYBN4.00E-84Putative uncharacterized protein {ECO:0000313|EMBL:ACU22114.1}
TAIRAT5G576201.00E-76myb domain protein 36

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000108893038894987+
Transcript Sequence

Network for GWHGAAEX000892

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding14628.60E-17
PF00249.30Myb_DNA-binding691119.40E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.250
SRR2545915Juvenile tuber0.500
SRP108465SRR5643513five period of Gastrodia elata5.440
SRR5643514five period of Gastrodia elata8.550
SRR5643515five period of Gastrodia elata2.930
SRR5643524five period of Gastrodia elata4.930
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata1.310
SRR5643660five period of Gastrodia elata1.220
SRR5643661five period of Gastrodia elata1.040
SRR5643662five period of Gastrodia elata0.050
SRR5643663five period of Gastrodia elata0.160
SRR5643664five period of Gastrodia elata0.330
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.450
SRR6049655Rhizomagastrodiae_C368-T10_good_17.900
SRR6049656Rhizomagastrodiae_C368-T07_good_17.360
SRR6049657Rhizomagastrodiae_C368-T07_good_12.130
SRR6049658Rhizomagastrodiae_C368-T04_good_14.090
SRR6049659Rhizomagastrodiae_C368-T04_good_14.370
SRR6049660Rhizomagastrodiae_C368-T01_good_15.610
SRR6049661Rhizomagastrodiae_C368-T04_good_12.630
SRR6049662Rhizomagastrodiae_C368-T01_good_18.220
SRR6049663Rhizomagastrodiae_C368-T01_good_113.170
SRR6049664Rhizomagastrodiae_C368-T10_good_113.250
SRR6049665Rhizomagastrodiae_C368-T10_good_113.250
SRP279888GastroGastrodia elata tuber 0.03
JuvenJuvenile tuber2.34
Mother_GastroMother tuber of Gastrodia elata 0.49
Mother_JuvenMother tuber of Juvenile 0.39