Detail information of GWHGAAEX000895/evm.TU.scaffold_102.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743836832|ref|XP_010936218.1|0PREDICTED: uncharacterized protein LOC105055900 isoform X1 [Elaeis guineensis]
trEMBLtr|M0UCD1|M0UCD1_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP25730_001}
TAIRAT2G25740_12.00E-92Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010815987241612126-
Transcript Sequence

Network for GWHGAAEX000895

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01925.18TauE721906.40E-11
PF01925.18TauE2534371.80E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.940
SRR2545915Juvenile tuber44.710
SRP108465SRR5643513five period of Gastrodia elata74.500
SRR5643514five period of Gastrodia elata32.530
SRR5643515five period of Gastrodia elata55.830
SRR5643524five period of Gastrodia elata56.490
SRR5643525five period of Gastrodia elata31.470
SRR5643528five period of Gastrodia elata42.160
SRR5643658five period of Gastrodia elata36.210
SRR5643659five period of Gastrodia elata77.400
SRR5643660five period of Gastrodia elata82.010
SRR5643661five period of Gastrodia elata78.880
SRR5643662five period of Gastrodia elata59.750
SRR5643663five period of Gastrodia elata75.090
SRR5643664five period of Gastrodia elata64.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_189.580
SRR6049655Rhizomagastrodiae_C368-T10_good_143.250
SRR6049656Rhizomagastrodiae_C368-T07_good_196.490
SRR6049657Rhizomagastrodiae_C368-T07_good_182.210
SRR6049658Rhizomagastrodiae_C368-T04_good_156.710
SRR6049659Rhizomagastrodiae_C368-T04_good_156.640
SRR6049660Rhizomagastrodiae_C368-T01_good_164.660
SRR6049661Rhizomagastrodiae_C368-T04_good_156.620
SRR6049662Rhizomagastrodiae_C368-T01_good_146.120
SRR6049663Rhizomagastrodiae_C368-T01_good_139.250
SRR6049664Rhizomagastrodiae_C368-T10_good_171.210
SRR6049665Rhizomagastrodiae_C368-T10_good_171.210
SRP279888GastroGastrodia elata tuber 51.13
JuvenJuvenile tuber103.49
Mother_GastroMother tuber of Gastrodia elata 71.10
Mother_JuvenMother tuber of Juvenile 42.20