Detail information of GWHGAAEX000898/evm.TU.scaffold_102.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672127406|ref|XP_008787166.1|2.89E-75PREDICTED: LOB domain-containing protein 37 [Phoenix dactylifera]
Swissprottr|Q9FN11|LBD37_ARATH2.00E-67LOB domain-containing protein 37
trEMBLtr|M0SNT0|M0SNT0_MUSAM3.00E-75Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P14150_001}
TAIRAT5G674208.00E-67LOB domain-containing protein 37

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010819233741924442+
Transcript Sequence

Network for GWHGAAEX000898

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03195.13LOB21007.20E-25
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLOB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.580
SRR2545915Juvenile tuber59.260
SRP108465SRR5643513five period of Gastrodia elata141.670
SRR5643514five period of Gastrodia elata80.850
SRR5643515five period of Gastrodia elata90.880
SRR5643524five period of Gastrodia elata68.530
SRR5643525five period of Gastrodia elata228.710
SRR5643528five period of Gastrodia elata153.610
SRR5643658five period of Gastrodia elata154.760
SRR5643659five period of Gastrodia elata127.050
SRR5643660five period of Gastrodia elata144.360
SRR5643661five period of Gastrodia elata100.780
SRR5643662five period of Gastrodia elata68.600
SRR5643663five period of Gastrodia elata79.570
SRR5643664five period of Gastrodia elata94.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1298.990
SRR6049655Rhizomagastrodiae_C368-T10_good_199.890
SRR6049656Rhizomagastrodiae_C368-T07_good_1207.020
SRR6049657Rhizomagastrodiae_C368-T07_good_1249.640
SRR6049658Rhizomagastrodiae_C368-T04_good_1188.610
SRR6049659Rhizomagastrodiae_C368-T04_good_1168.690
SRR6049660Rhizomagastrodiae_C368-T01_good_1126.170
SRR6049661Rhizomagastrodiae_C368-T04_good_1144.280
SRR6049662Rhizomagastrodiae_C368-T01_good_1101.000
SRR6049663Rhizomagastrodiae_C368-T01_good_195.870
SRR6049664Rhizomagastrodiae_C368-T10_good_1220.910
SRR6049665Rhizomagastrodiae_C368-T10_good_1220.910
SRP279888GastroGastrodia elata tuber 141.27
JuvenJuvenile tuber226.25
Mother_GastroMother tuber of Gastrodia elata 43.52
Mother_JuvenMother tuber of Juvenile 133.84