Detail information of GWHGAAEX000903/evm.TU.scaffold_102.44_evm.TU.scaffold_102.45


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|327404186|ref|YP_004345024.1|8.00E-55GTP-binding protein engB [Fluviicola taffensis DSM 16823]
KOGKOG24861.00E-125Predicted GTPase
nrgi|672133282|ref|XP_008790252.1|4.11E-147PREDICTED: GTP-binding protein At2g22870 [Phoenix dactylifera]
Swissprottr|O81004|Y2287_ARATH8.00E-134GTP-binding protein At2g22870
trEMBLtr|A0A061DIP3|A0A061DIP3_THECC4.00E-138P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1 {ECO:0000313|EMBL:EOX91741.1}
TAIRAT2G228701.00E-125P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010824518502456863-
Transcript Sequence

Network for GWHGAAEX000903

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01926.22MMR_HSR11252421.30E-20
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.040
SRR2545915Juvenile tuber3.590
SRP108465SRR5643513five period of Gastrodia elata10.630
SRR5643514five period of Gastrodia elata11.710
SRR5643515five period of Gastrodia elata11.670
SRR5643524five period of Gastrodia elata10.420
SRR5643525five period of Gastrodia elata13.730
SRR5643528five period of Gastrodia elata11.350
SRR5643658five period of Gastrodia elata9.740
SRR5643659five period of Gastrodia elata11.130
SRR5643660five period of Gastrodia elata12.770
SRR5643661five period of Gastrodia elata15.800
SRR5643662five period of Gastrodia elata14.650
SRR5643663five period of Gastrodia elata15.530
SRR5643664five period of Gastrodia elata13.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.970
SRR6049655Rhizomagastrodiae_C368-T10_good_111.990
SRR6049656Rhizomagastrodiae_C368-T07_good_19.660
SRR6049657Rhizomagastrodiae_C368-T07_good_17.020
SRR6049658Rhizomagastrodiae_C368-T04_good_17.120
SRR6049659Rhizomagastrodiae_C368-T04_good_18.390
SRR6049660Rhizomagastrodiae_C368-T01_good_16.470
SRR6049661Rhizomagastrodiae_C368-T04_good_18.430
SRR6049662Rhizomagastrodiae_C368-T01_good_111.220
SRR6049663Rhizomagastrodiae_C368-T01_good_18.580
SRR6049664Rhizomagastrodiae_C368-T10_good_114.180
SRR6049665Rhizomagastrodiae_C368-T10_good_114.180
SRP279888GastroGastrodia elata tuber 14.53
JuvenJuvenile tuber14.28
Mother_GastroMother tuber of Gastrodia elata 13.34
Mother_JuvenMother tuber of Juvenile 11.20