Detail information of GWHGAAEX000908/evm.TU.scaffold_102.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|333911472|ref|YP_004485205.1|6.00E-16ZPR1-like zinc finger protein [Methanotorris igneus Kol 5]
KOGKOG27030C4-type Zn-finger protein
nrgi|743882137|ref|XP_010909082.1|0PREDICTED: zinc finger protein zpr1-like [Elaeis guineensis]
trEMBLtr|I1I7U6|I1I7U6_BRADI0Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI3G38220.1}
TAIRAT5G224800ZPR1 zinc-finger domain protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010833147333330583-
Transcript Sequence

Network for GWHGAAEX000908

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03367.12zf-ZPR1321912.50E-53
PF03367.12zf-ZPR12904481.80E-50
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270Molecular Functionzinc ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.800
SRR2545915Juvenile tuber31.200
SRP108465SRR5643513five period of Gastrodia elata37.040
SRR5643514five period of Gastrodia elata42.320
SRR5643515five period of Gastrodia elata46.920
SRR5643524five period of Gastrodia elata46.360
SRR5643525five period of Gastrodia elata13.140
SRR5643528five period of Gastrodia elata14.060
SRR5643658five period of Gastrodia elata12.790
SRR5643659five period of Gastrodia elata34.740
SRR5643660five period of Gastrodia elata33.680
SRR5643661five period of Gastrodia elata44.630
SRR5643662five period of Gastrodia elata33.510
SRR5643663five period of Gastrodia elata36.240
SRR5643664five period of Gastrodia elata28.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.300
SRR6049655Rhizomagastrodiae_C368-T10_good_131.620
SRR6049656Rhizomagastrodiae_C368-T07_good_132.750
SRR6049657Rhizomagastrodiae_C368-T07_good_131.340
SRR6049658Rhizomagastrodiae_C368-T04_good_120.760
SRR6049659Rhizomagastrodiae_C368-T04_good_120.690
SRR6049660Rhizomagastrodiae_C368-T01_good_123.470
SRR6049661Rhizomagastrodiae_C368-T04_good_125.950
SRR6049662Rhizomagastrodiae_C368-T01_good_144.440
SRR6049663Rhizomagastrodiae_C368-T01_good_133.770
SRR6049664Rhizomagastrodiae_C368-T10_good_141.340
SRR6049665Rhizomagastrodiae_C368-T10_good_141.340
SRP279888GastroGastrodia elata tuber 60.37
JuvenJuvenile tuber49.23
Mother_GastroMother tuber of Gastrodia elata 29.78
Mother_JuvenMother tuber of Juvenile 43.40