Detail information of GWHGAAEX000916/evm.TU.scaffold_103.2
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|42521914|ref|NP_967294.1| | 2.00E-53 | maleylacetoacetate isomerase / glutathione S-transferase [Bdellovibrio bacteriovorus HD100] |
| KOG | KOG0868 | 4.00E-86 | Glutathione S-transferase |
| nr | gi|672194019|ref|XP_008776183.1| | 1.33E-109 | PREDICTED: glutathione S-transferase zeta class-like [Phoenix dactylifera] |
| Swissprot | tr|P57108|GSTZ_EUPES | 2.00E-89 | Glutathione S-transferase zeta class |
| trEMBL | tr|M0TUL0|M0TUL0_MUSAM | 6.00E-107 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P29070_001} |
| TAIR | AT2G02390 | 4.00E-86 | glutathione S-transferase zeta 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000104 | 19770 | 52276 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000916
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02798.19 | GST_N | 5 | 78 | 5.50E-18 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01800 | maiA, GSTZ1 | Metabolic pathways | map01100 |
| Microbial metabolism in diverse environments | map01120 | ||
| Tyrosine metabolism | map00350 | ||
| Styrene degradation | map00643 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009072 | Biological Process | aromatic amino acid family metabolic process |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0005515 | Molecular Function | protein binding |
| GO:0005737 | Cellular Component | cytoplasm |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 99.170 |
| SRR2545915 | Juvenile tuber | 126.060 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 256.220 |
| SRR5643514 | five period of Gastrodia elata | 327.090 | |
| SRR5643515 | five period of Gastrodia elata | 293.050 | |
| SRR5643524 | five period of Gastrodia elata | 334.960 | |
| SRR5643525 | five period of Gastrodia elata | 128.890 | |
| SRR5643528 | five period of Gastrodia elata | 142.880 | |
| SRR5643658 | five period of Gastrodia elata | 109.930 | |
| SRR5643659 | five period of Gastrodia elata | 194.430 | |
| SRR5643660 | five period of Gastrodia elata | 184.960 | |
| SRR5643661 | five period of Gastrodia elata | 217.400 | |
| SRR5643662 | five period of Gastrodia elata | 184.290 | |
| SRR5643663 | five period of Gastrodia elata | 193.560 | |
| SRR5643664 | five period of Gastrodia elata | 171.170 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 165.260 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 326.330 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 193.190 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 127.490 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 97.850 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 85.300 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 105.640 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 105.120 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 180.960 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 140.110 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 268.260 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 268.260 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 179.00 |
| Juven | Juvenile tuber | 254.18 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 147.49 | |
| Mother_Juven | Mother tuber of Juvenile | 185.70 |