Detail information of GWHGAAEX000935/evm.TU.scaffold_103.28
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 2.00E-16 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| nr | gi|672129487|ref|XP_008788252.1| | 0 | PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q9ASS4|Y5838_ARATH | 0 | Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (Precursor) |
| trEMBL | tr|B8AYA2|B8AYA2_ORYSI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:EEC79229.1} |
| TAIR | AT5G48380 | 0 | BAK1-interacting receptor-like kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000104 | 730702 | 734072 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000935
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF08263.11 | LRRNT_2 | 41 | 82 | 0.00017 |
| PF07714.16 | Pkinase_Tyr | 315 | 584 | 8.00E-34 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_LRR-Xa |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 25.350 |
| SRR2545915 | Juvenile tuber | 25.390 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.180 |
| SRR5643514 | five period of Gastrodia elata | 11.610 | |
| SRR5643515 | five period of Gastrodia elata | 20.520 | |
| SRR5643524 | five period of Gastrodia elata | 13.810 | |
| SRR5643525 | five period of Gastrodia elata | 47.210 | |
| SRR5643528 | five period of Gastrodia elata | 24.150 | |
| SRR5643658 | five period of Gastrodia elata | 24.900 | |
| SRR5643659 | five period of Gastrodia elata | 30.870 | |
| SRR5643660 | five period of Gastrodia elata | 24.740 | |
| SRR5643661 | five period of Gastrodia elata | 35.840 | |
| SRR5643662 | five period of Gastrodia elata | 36.220 | |
| SRR5643663 | five period of Gastrodia elata | 30.010 | |
| SRR5643664 | five period of Gastrodia elata | 50.450 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 23.690 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 15.980 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 20.250 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 19.520 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 17.090 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 18.950 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 25.310 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 17.250 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 18.330 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 26.880 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 20.970 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 20.970 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 19.83 |
| Juven | Juvenile tuber | 18.42 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 34.01 | |
| Mother_Juven | Mother tuber of Juvenile | 25.41 |