Gene detail

Detail information of GWHGAAEX000941/evm.TU.scaffold_103.34

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672136204\|ref\|XP_008791791.1\|	5.13E-50	PREDICTED: uncharacterized protein LOC103708574 [Phoenix dactylifera]
trEMBL	tr\|D7T2D2\|D7T2D2_VITVI	3.00E-37	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI24663.3}
TAIR	AT2G43630	4.00E-30	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000104	851978	861485	-

Transcript Sequence
>GWHTAAEX000941 CCCTGCGTCCCTTCTTCCTTACACGCATCGCCGATCCATAAATGTCCTTCTTTTAACGTTCCTCACGCGCTTCCTCCTTCCTTGGAGGATTAGCCGATCCTCCATCTCCCGACACCTCCACTTTTTGAATCCGGTCAAGTCAACCTAGATCCGGCGACATCCATTCACGCTGATCCTCAGCCTCAACATCAGCTCATCGCCTCCTTCTGTTTTCTTTTGGAGAAATCAACGAATCTTTTCACTTCCTCCGCACTTGTAGCCGATCCAGTTAGCACCTCCACTAGTTTTATGCATGAGTCAGCACGCATTCGTTAATTCACATAAGATCTGATAAAGGGATGAGCTGCGTACATTATAATGCATTCAATGCCACTGCCAGGTTTGGTACCCCTGTTACAATACTGAACACAACCTTTATGTCTCGGGCTTCGGTTGTTCATATGGCATCTTTATGTACTTCAACACCAACCTTGAAGCAACATAAAAGGGCAAAGATAGTTCACAGTTTTCCAAAATATAAAACTGGCCCTCCAGTATGCTTGTTTGGAGGAAAAGGGAACTCTACTGGTGAAAGCATGGGCTTTTCATGGGATTCACTAAAGGATGCTTTGAGGGACTTGAGAAAGGAAAAAAAAGTGCAGGATATGTCAAGGGATCAGATGCGGCAATGGGAATTTGGCGGCGATGATGATGATGGAAATCCTCCTGGTGGCGGTCACGGCGGTGGCGGCGGCTTTGGCAATGGAGAAGATGGCAGCCTTGACGGAATTTTGGATGAGACATTGCAAGTTATATTTGCAACTCTTGCTTTCATATGTCTGTATATTTACATAATCAAGGGGCCATCGCTGGTCTTGCTTGCAAGGGACTACATTAAGTACCGCCTCGGTGGCGCTCCAAGTTTGAGGCTTCAAAACATCATGGATAGGTGGACGAAGTCTATTGAGAAATTTCGCTGGGTGGAAGAAGATGAAGACTTGCTGGAGAAGATGATCATGGTTACCCCGACCTGGTGGTACGATCCGCAGAGAACTGCACGCTTCTTGAAATCGAAACTGGATGAATATGAGCAGAATGCGAAGGAGGCCCGAGCTTACGCAAATTCTGACCAGCAAAATTCTATGGGACCGGAGGCATAGCAATGATTTATGCATGCAGTCGCTTGTTTTGAATGCTGAACAAATTTTAATTTTGGAGTATGCTTTTTGATCTTCTTCAACTAAAACCATAATTTTAATTTTTTGAATTCATATAACTGAAAGTGGATATGTGAGGTGTAAAACTTGCATTATACATTGAGAGATGAAAGTGCTGTTTTGTAAATATTAAAGTTGTAGTGCTGCATTTGTAAATATATTTTTTCAAGGTAGTCAACTTATTTGGTTTAAAGGGCAGTGCATATTGATTGAAAACACTCAA

Network for GWHGAAEX000941

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	29.560
SRP064423	SRR2545915	Juvenile tuber	32.750
SRP108465	SRR5643513	five period of Gastrodia elata	48.040
	SRR5643514	five period of Gastrodia elata	45.530
	SRR5643515	five period of Gastrodia elata	48.930
	SRR5643524	five period of Gastrodia elata	48.100
	SRR5643525	five period of Gastrodia elata	58.410
	SRR5643528	five period of Gastrodia elata	57.590
	SRR5643658	five period of Gastrodia elata	52.620
	SRR5643659	five period of Gastrodia elata	57.650
	SRR5643660	five period of Gastrodia elata	52.680
	SRR5643661	five period of Gastrodia elata	53.270
	SRR5643662	five period of Gastrodia elata	62.200
	SRR5643663	five period of Gastrodia elata	55.680
	SRR5643664	five period of Gastrodia elata	56.210
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	45.130
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	39.760
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	51.150
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	42.810
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	43.370
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	35.010
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	44.850
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	40.710
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	51.810
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	50.090
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	53.140
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	53.140
SRP279888	Gastro	Gastrodia elata tuber	60.57
	Juven	Juvenile tuber	46.53
	Mother_Gastro	Mother tuber of Gastrodia elata	56.12
	Mother_Juven	Mother tuber of Juvenile	55.12