Detail information of GWHGAAEX000975/evm.TU.scaffold_103.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428320931|ref|YP_007118813.1|2.00E-19putative signal transduction protein with EFhand domain [Oscillatoria nigro-viridis PCC 7112]
KOGKOG00271.00E-64Calmodulin and related proteins (EF-Hand superfamily)
nrgi|720091221|ref|XP_010245349.1|6.27E-72PREDICTED: calmodulin-like protein 3 [Nelumbo nucifera]
Swissprottr|Q9LNE7|CML7_ARATH3.00E-65Calmodulin-like protein 7
trEMBLtr|M0S5H5|M0S5H5_MUSAM2.00E-72Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P05840_001}
TAIRAT1G059901.00E-64EF hand calcium-binding protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010429067632907608-
Transcript Sequence

Network for GWHGAAEX000975

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_731912.50E-12
PF13499.5EF-hand_71051712.60E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13448CML Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.090
SRR2545915Juvenile tuber2.720
SRP108465SRR5643513five period of Gastrodia elata18.870
SRR5643514five period of Gastrodia elata17.710
SRR5643515five period of Gastrodia elata14.430
SRR5643524five period of Gastrodia elata14.330
SRR5643525five period of Gastrodia elata37.630
SRR5643528five period of Gastrodia elata36.950
SRR5643658five period of Gastrodia elata20.220
SRR5643659five period of Gastrodia elata16.270
SRR5643660five period of Gastrodia elata16.400
SRR5643661five period of Gastrodia elata14.720
SRR5643662five period of Gastrodia elata15.880
SRR5643663five period of Gastrodia elata15.290
SRR5643664five period of Gastrodia elata17.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.510
SRR6049655Rhizomagastrodiae_C368-T10_good_114.790
SRR6049656Rhizomagastrodiae_C368-T07_good_19.930
SRR6049657Rhizomagastrodiae_C368-T07_good_114.060
SRR6049658Rhizomagastrodiae_C368-T04_good_17.370
SRR6049659Rhizomagastrodiae_C368-T04_good_19.150
SRR6049660Rhizomagastrodiae_C368-T01_good_19.280
SRR6049661Rhizomagastrodiae_C368-T04_good_18.240
SRR6049662Rhizomagastrodiae_C368-T01_good_19.430
SRR6049663Rhizomagastrodiae_C368-T01_good_17.650
SRR6049664Rhizomagastrodiae_C368-T10_good_112.750
SRR6049665Rhizomagastrodiae_C368-T10_good_112.750
SRP279888GastroGastrodia elata tuber 13.94
JuvenJuvenile tuber19.70
Mother_GastroMother tuber of Gastrodia elata 64.98
Mother_JuvenMother tuber of Juvenile 34.79