Detail information of GWHGAAEX000983/evm.TU.scaffold_103.89


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297621203|ref|YP_003709340.1|3.00E-23serine/threonine PP2C protein phosphatase [Waddlia chondrophila WSU 86-1044]
KOGKOG06985.00E-86Serine/threonine protein phosphatase
nrgi|695047133|ref|XP_009411435.1|4.24E-138PREDICTED: probable protein phosphatase 2C 74 [Musa acuminata subsp. malaccensis]
Swissprottr|Q2QWE3|P2C77_ORYSJ3.00E-92Probable protein phosphatase 2C 77
trEMBLtr|M0TPR9|M0TPR9_MUSAM1.00E-118Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P12160_001}
TAIRAT2G300205.00E-86Protein phosphatase 2C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010431871103189626-
Transcript Sequence

Network for GWHGAAEX000983

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.20PP2C823191.30E-56
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity
GO:0043169Molecular Functioncation binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.080
SRR2545915Juvenile tuber11.300
SRP108465SRR5643513five period of Gastrodia elata10.000
SRR5643514five period of Gastrodia elata6.980
SRR5643515five period of Gastrodia elata35.090
SRR5643524five period of Gastrodia elata7.120
SRR5643525five period of Gastrodia elata11.070
SRR5643528five period of Gastrodia elata23.460
SRR5643658five period of Gastrodia elata3.390
SRR5643659five period of Gastrodia elata17.830
SRR5643660five period of Gastrodia elata5.050
SRR5643661five period of Gastrodia elata8.610
SRR5643662five period of Gastrodia elata21.490
SRR5643663five period of Gastrodia elata6.910
SRR5643664five period of Gastrodia elata16.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.250
SRR6049655Rhizomagastrodiae_C368-T10_good_118.020
SRR6049656Rhizomagastrodiae_C368-T07_good_115.470
SRR6049657Rhizomagastrodiae_C368-T07_good_18.960
SRR6049658Rhizomagastrodiae_C368-T04_good_18.500
SRR6049659Rhizomagastrodiae_C368-T04_good_110.800
SRR6049660Rhizomagastrodiae_C368-T01_good_110.540
SRR6049661Rhizomagastrodiae_C368-T04_good_17.790
SRR6049662Rhizomagastrodiae_C368-T01_good_17.080
SRR6049663Rhizomagastrodiae_C368-T01_good_111.620
SRR6049664Rhizomagastrodiae_C368-T10_good_122.600
SRR6049665Rhizomagastrodiae_C368-T10_good_122.600
SRP279888GastroGastrodia elata tuber 2.99
JuvenJuvenile tuber1.42
Mother_GastroMother tuber of Gastrodia elata 154.16
Mother_JuvenMother tuber of Juvenile 74.34