Detail information of GWHGAAEX000993/evm.TU.scaffold_104.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|307152986|ref|YP_003888370.1|1.00E-86FeS assembly protein SufD [Cyanothece sp. PCC 7822]
nrgi|743834829|ref|XP_010935634.1|0PREDICTED: protein ABCI7, chloroplastic-like [Elaeis guineensis]
Swissprottr|Q9LQK7|AB7I_ARATH1.00E-171Protein ABCI7, chloroplastic (Precursor)
trEMBLtr|M0RI68|M0RI68_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P14420_001}
TAIRAT1G325004.00E-171non-intrinsic ABC protein 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000103136863165963+
Transcript Sequence

Network for GWHGAAEX000993

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01458.16UPF00512204481.50E-61
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016226Biological Processiron-sulfur cluster assembly

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.590
SRR2545915Juvenile tuber34.090
SRP108465SRR5643513five period of Gastrodia elata22.460
SRR5643514five period of Gastrodia elata24.640
SRR5643515five period of Gastrodia elata19.380
SRR5643524five period of Gastrodia elata21.330
SRR5643525five period of Gastrodia elata18.910
SRR5643528five period of Gastrodia elata17.840
SRR5643658five period of Gastrodia elata18.370
SRR5643659five period of Gastrodia elata19.020
SRR5643660five period of Gastrodia elata24.340
SRR5643661five period of Gastrodia elata18.810
SRR5643662five period of Gastrodia elata20.990
SRR5643663five period of Gastrodia elata24.210
SRR5643664five period of Gastrodia elata24.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.540
SRR6049655Rhizomagastrodiae_C368-T10_good_133.290
SRR6049656Rhizomagastrodiae_C368-T07_good_123.910
SRR6049657Rhizomagastrodiae_C368-T07_good_126.850
SRR6049658Rhizomagastrodiae_C368-T04_good_122.220
SRR6049659Rhizomagastrodiae_C368-T04_good_119.950
SRR6049660Rhizomagastrodiae_C368-T01_good_121.420
SRR6049661Rhizomagastrodiae_C368-T04_good_118.730
SRR6049662Rhizomagastrodiae_C368-T01_good_119.710
SRR6049663Rhizomagastrodiae_C368-T01_good_116.730
SRR6049664Rhizomagastrodiae_C368-T10_good_122.950
SRR6049665Rhizomagastrodiae_C368-T10_good_122.950
SRP279888GastroGastrodia elata tuber 24.03
JuvenJuvenile tuber40.43
Mother_GastroMother tuber of Gastrodia elata 16.02
Mother_JuvenMother tuber of Juvenile 24.10