Detail information of GWHGAAEX000999/evm.TU.scaffold_104.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|17227548|ref|NP_484096.1|3.00E-25thioredoxin [Nostoc sp. PCC 7120]
KOGKOG09108.00E-29Thioredoxin-like protein
nrgi|672114761|ref|XP_008778484.1|1.19E-41PREDICTED: thioredoxin-like [Phoenix dactylifera]
Swissprottr|Q6H7E4|TRXM1_ORYSJ2.00E-39Thioredoxin M1, chloroplastic (Precursor)
trEMBLtr|V5JD67|V5JD67_9ASPA4.00E-40M-type thioredoxin protein 1 {ECO:0000313|EMBL:AGI60278.1}
TAIRAT1G036758.00E-29Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000103278501295436-
Transcript Sequence

Network for GWHGAAEX000999

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00085.19Thioredoxin921697.60E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03671trxA NOD-like receptor signaling pathway map04621

Gene Ontology

GO term OntologyName
GO:0045454Biological Processcell redox homeostasis

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.640
SRR2545915Juvenile tuber21.500
SRP108465SRR5643513five period of Gastrodia elata23.620
SRR5643514five period of Gastrodia elata23.340
SRR5643515five period of Gastrodia elata22.250
SRR5643524five period of Gastrodia elata23.360
SRR5643525five period of Gastrodia elata20.260
SRR5643528five period of Gastrodia elata19.490
SRR5643658five period of Gastrodia elata18.060
SRR5643659five period of Gastrodia elata35.910
SRR5643660five period of Gastrodia elata36.070
SRR5643661five period of Gastrodia elata36.510
SRR5643662five period of Gastrodia elata49.400
SRR5643663five period of Gastrodia elata51.920
SRR5643664five period of Gastrodia elata49.880
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.500
SRR6049655Rhizomagastrodiae_C368-T10_good_112.990
SRR6049656Rhizomagastrodiae_C368-T07_good_113.320
SRR6049657Rhizomagastrodiae_C368-T07_good_111.490
SRR6049658Rhizomagastrodiae_C368-T04_good_17.570
SRR6049659Rhizomagastrodiae_C368-T04_good_16.590
SRR6049660Rhizomagastrodiae_C368-T01_good_17.920
SRR6049661Rhizomagastrodiae_C368-T04_good_17.970
SRR6049662Rhizomagastrodiae_C368-T01_good_110.550
SRR6049663Rhizomagastrodiae_C368-T01_good_17.130
SRR6049664Rhizomagastrodiae_C368-T10_good_116.400
SRR6049665Rhizomagastrodiae_C368-T10_good_116.400
SRP279888GastroGastrodia elata tuber 30.88
JuvenJuvenile tuber17.69
Mother_GastroMother tuber of Gastrodia elata 11.53
Mother_JuvenMother tuber of Juvenile 9.44