Detail information of GWHGAAEX001001/evm.TU.scaffold_104.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|225849930|ref|YP_002730164.1|1.00E-19ankyrin domain protein [Persephonella marina EX-H1]
KOGKOG08171.00E-123Acyl-CoA-binding protein
nrgi|743831904|ref|XP_010934831.1|7.31E-154PREDICTED: acyl-CoA-binding domain-containing protein 1 [Elaeis guineensis]
Swissprottr|Q9STP8|ACBP2_ARATH3.00E-124Acyl-CoA-binding domain-containing protein 2
trEMBLtr|Q4L0H4|Q4L0H4_AGAAM3.00E-152Membrane acyl-CoA binding protein {ECO:0000313|EMBL:AAT81164.1}
TAIRAT4G277801.00E-123acyl-CoA binding protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000103341641370485-
Transcript Sequence

Network for GWHGAAEX001001

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00887.18ACBP1101931.70E-26
PF12796.6Ank_22453341.20E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0000062Molecular Functionfatty-acyl-CoA binding
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms66.880
SRR2545915Juvenile tuber53.140
SRP108465SRR5643513five period of Gastrodia elata58.150
SRR5643514five period of Gastrodia elata51.230
SRR5643515five period of Gastrodia elata49.410
SRR5643524five period of Gastrodia elata51.570
SRR5643525five period of Gastrodia elata61.880
SRR5643528five period of Gastrodia elata55.630
SRR5643658five period of Gastrodia elata48.200
SRR5643659five period of Gastrodia elata63.950
SRR5643660five period of Gastrodia elata72.210
SRR5643661five period of Gastrodia elata69.600
SRR5643662five period of Gastrodia elata63.750
SRR5643663five period of Gastrodia elata65.680
SRR5643664five period of Gastrodia elata68.630
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_160.900
SRR6049655Rhizomagastrodiae_C368-T10_good_161.060
SRR6049656Rhizomagastrodiae_C368-T07_good_159.460
SRR6049657Rhizomagastrodiae_C368-T07_good_163.440
SRR6049658Rhizomagastrodiae_C368-T04_good_158.280
SRR6049659Rhizomagastrodiae_C368-T04_good_163.240
SRR6049660Rhizomagastrodiae_C368-T01_good_158.310
SRR6049661Rhizomagastrodiae_C368-T04_good_157.620
SRR6049662Rhizomagastrodiae_C368-T01_good_157.290
SRR6049663Rhizomagastrodiae_C368-T01_good_158.280
SRR6049664Rhizomagastrodiae_C368-T10_good_164.790
SRR6049665Rhizomagastrodiae_C368-T10_good_164.790
SRP279888GastroGastrodia elata tuber 69.54
JuvenJuvenile tuber82.18
Mother_GastroMother tuber of Gastrodia elata 41.14
Mother_JuvenMother tuber of Juvenile 54.26