Detail information of GWHGAAEX001003/evm.TU.scaffold_104.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|449088034|ref|YP_007420475.1|2.00E-162Catalase [Bacillus thuringiensis serovar kurstaki str. HD73]
KOGKOG00470Catalase
nrgi|672136407|ref|XP_008791900.1|0PREDICTED: catalase isozyme 2 [Phoenix dactylifera]
Swissprottr|P55308|CATA2_HORVU0Catalase isozyme 2
trEMBLtr|B3TLY5|B3TLY5_ELAGV0Catalase {ECO:0000256|RuleBase:RU000498}
TAIRAT4G350900catalase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000103393077397838+
Transcript Sequence

Network for GWHGAAEX001003

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00199.18Catalase194032.10E-169
PF06628.11Catalase-rel4294929.30E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03781katE, CAT, catB, srpA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Glyoxylate and dicarboxylate metabolismmap00630
Tryptophan metabolismmap00380
MAPK signaling pathway - plantmap04016
MAPK signaling pathway - yeastmap04011
FoxO signaling pathwaymap04068
Peroxisomemap04146
Longevity regulating pathwaymap04211
Longevity regulating pathway - wormmap04212
Longevity regulating pathway - multiple speciesmap04213

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0006979Biological Processresponse to oxidative stress
GO:0020037Molecular Functionheme binding
GO:0004096Molecular Functioncatalase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1032.290
SRR2545915Juvenile tuber1047.260
SRP108465SRR5643513five period of Gastrodia elata1369.020
SRR5643514five period of Gastrodia elata1048.000
SRR5643515five period of Gastrodia elata1041.500
SRR5643524five period of Gastrodia elata1119.000
SRR5643525five period of Gastrodia elata1513.100
SRR5643528five period of Gastrodia elata1021.870
SRR5643658five period of Gastrodia elata1745.030
SRR5643659five period of Gastrodia elata1349.850
SRR5643660five period of Gastrodia elata1621.750
SRR5643661five period of Gastrodia elata1302.210
SRR5643662five period of Gastrodia elata828.030
SRR5643663five period of Gastrodia elata1105.140
SRR5643664five period of Gastrodia elata1135.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11799.570
SRR6049655Rhizomagastrodiae_C368-T10_good_11677.070
SRR6049656Rhizomagastrodiae_C368-T07_good_11645.420
SRR6049657Rhizomagastrodiae_C368-T07_good_11770.710
SRR6049658Rhizomagastrodiae_C368-T04_good_11798.240
SRR6049659Rhizomagastrodiae_C368-T04_good_11997.530
SRR6049660Rhizomagastrodiae_C368-T01_good_11629.740
SRR6049661Rhizomagastrodiae_C368-T04_good_11745.650
SRR6049662Rhizomagastrodiae_C368-T01_good_11613.870
SRR6049663Rhizomagastrodiae_C368-T01_good_11328.930
SRR6049664Rhizomagastrodiae_C368-T10_good_11861.760
SRR6049665Rhizomagastrodiae_C368-T10_good_11861.760
SRP279888GastroGastrodia elata tuber 818.13
JuvenJuvenile tuber1,862.66
Mother_GastroMother tuber of Gastrodia elata 1,044.95
Mother_JuvenMother tuber of Juvenile 825.48