Detail information of GWHGAAEX001015/evm.TU.scaffold_104.29


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG24432.00E-138Uncharacterized conserved protein
nrgi|743831806|ref|XP_010934803.1|0PREDICTED: signal peptide peptidase-like 1 [Elaeis guineensis]
Swissprottr|Q7G7C7|SIPL1_ORYSJ0Signal peptide peptidase-like 1
trEMBLtr|W1NHV7|W1NHV7_AMBTC0Uncharacterized protein {ECO:0000313|EMBL:ERM95061.1}
TAIRAT4G334102.00E-138SIGNAL PEPTIDE PEPTIDASE-LIKE 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000103736867746985-
Transcript Sequence

Network for GWHGAAEX001015

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04258.12Peptidase_A22B503544.30E-73
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0004190Molecular Functionaspartic-type endopeptidase activity
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.000
SRR2545915Juvenile tuber20.980
SRP108465SRR5643513five period of Gastrodia elata30.670
SRR5643514five period of Gastrodia elata35.400
SRR5643515five period of Gastrodia elata29.940
SRR5643524five period of Gastrodia elata35.550
SRR5643525five period of Gastrodia elata22.720
SRR5643528five period of Gastrodia elata24.460
SRR5643658five period of Gastrodia elata24.200
SRR5643659five period of Gastrodia elata23.450
SRR5643660five period of Gastrodia elata21.680
SRR5643661five period of Gastrodia elata27.260
SRR5643662five period of Gastrodia elata24.080
SRR5643663five period of Gastrodia elata21.790
SRR5643664five period of Gastrodia elata15.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.390
SRR6049655Rhizomagastrodiae_C368-T10_good_127.470
SRR6049656Rhizomagastrodiae_C368-T07_good_127.750
SRR6049657Rhizomagastrodiae_C368-T07_good_119.790
SRR6049658Rhizomagastrodiae_C368-T04_good_120.070
SRR6049659Rhizomagastrodiae_C368-T04_good_119.760
SRR6049660Rhizomagastrodiae_C368-T01_good_122.690
SRR6049661Rhizomagastrodiae_C368-T04_good_122.920
SRR6049662Rhizomagastrodiae_C368-T01_good_138.710
SRR6049663Rhizomagastrodiae_C368-T01_good_132.940
SRR6049664Rhizomagastrodiae_C368-T10_good_141.060
SRR6049665Rhizomagastrodiae_C368-T10_good_141.060
SRP279888GastroGastrodia elata tuber 16.84
JuvenJuvenile tuber18.18
Mother_GastroMother tuber of Gastrodia elata 28.85
Mother_JuvenMother tuber of Juvenile 16.73