Detail information of GWHGAAEX001017/evm.TU.scaffold_104.31


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|152996457|ref|YP_001341292.1|4.00E-272OG-Fe(II) oxygenase [Marinomonas sp. MWYL1]
KOGKOG01432.00E-129Iron/ascorbate family oxidoreductases
nrgi|743835513|ref|XP_010935837.1|8.85E-150PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Elaeis guineensis]
Swissprottr|D4N501|DIOX2_PAPSO7.00E-57Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase
trEMBLtr|M0U766|M0U766_MUSAM4.00E-149Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP07550_001}
TAIRAT2G366902.00E-1292-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000103796427815614-
Transcript Sequence

Network for GWHGAAEX001017

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module5

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14226.5DIOX_N541531.00E-23
PF03171.192OG-FeII_Oxy2103053.80E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.220
SRR2545915Juvenile tuber1.990
SRP108465SRR5643513five period of Gastrodia elata51.790
SRR5643514five period of Gastrodia elata22.150
SRR5643515five period of Gastrodia elata26.800
SRR5643524five period of Gastrodia elata38.930
SRR5643525five period of Gastrodia elata1.030
SRR5643528five period of Gastrodia elata1.390
SRR5643658five period of Gastrodia elata0.550
SRR5643659five period of Gastrodia elata0.330
SRR5643660five period of Gastrodia elata0.430
SRR5643661five period of Gastrodia elata1.320
SRR5643662five period of Gastrodia elata1.230
SRR5643663five period of Gastrodia elata0.830
SRR5643664five period of Gastrodia elata0.730
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.850
SRR6049655Rhizomagastrodiae_C368-T10_good_110.250
SRR6049656Rhizomagastrodiae_C368-T07_good_14.140
SRR6049657Rhizomagastrodiae_C368-T07_good_11.940
SRR6049658Rhizomagastrodiae_C368-T04_good_10.550
SRR6049659Rhizomagastrodiae_C368-T04_good_10.490
SRR6049660Rhizomagastrodiae_C368-T01_good_10.960
SRR6049661Rhizomagastrodiae_C368-T04_good_11.040
SRR6049662Rhizomagastrodiae_C368-T01_good_15.000
SRR6049663Rhizomagastrodiae_C368-T01_good_12.140
SRR6049664Rhizomagastrodiae_C368-T10_good_14.870
SRR6049665Rhizomagastrodiae_C368-T10_good_14.870
SRP279888GastroGastrodia elata tuber 1.26
JuvenJuvenile tuber18.31
Mother_GastroMother tuber of Gastrodia elata 4.07
Mother_JuvenMother tuber of Juvenile 7.61