Gene detail

Database	Orthologs	E value	Annotation
KOG	KOG2191	2.00E-124	RNA-binding protein NOVA1/PASILLA and related KH domain proteins
nr	gi\|672114933\|ref\|XP_008779172.1\|	2.57E-171	PREDICTED: RNA-binding protein Nova-1-like [Phoenix dactylifera]
trEMBL	tr\|M0U5S6\|M0U5S6_MUSAM	2.00E-161	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_AchrUn_randomP02640_001}
TAIR	AT5G04430	2.00E-124	binding to TOMV RNA 1L (long form)

Scaffold	Start	End	Strand
GWHAAEX00000103	1015996	1060223	-

Transcript Sequence
>GWHTAAEX001024 ATGGATTCGGCCGATTTGGTCTACTCTCCTACTCATGATGGAGGCTCCAAGTCATCGTTTCGACCTGATTCCCCCGTAACAGATGACAAGGAGAGAACCACACACATTAGGTTTCTTGTGTCAAATACTTCTGCTGGTTCAATTATTGGAAAGGGTGGATCAACAATTAATGAGTTTCAGTCACAGTCTGGGGCTCGCATTCAGTTATCACGAAACCATGAATTCTTTCCTGGAACACCTGATAGGATAATCATGATTTCGGGAGCGTTTAGTGAAATATTGAAAGCAATGGAACTGATTCTTGAGAAACTTATGAATGAGGATGAAGACAATCATGATGTTGATATTAGGACAAAAGTAAGACTTATTGTTCCAAACAGTTCATGCGGTGCCATTATCGGAAAAGGCGGATCTAACATAAAGTCGTTTATAGAAGAATCCCAGGCTGACATCAAGATATCACCTCAAGATAATAATTATGCTGGATTCACTGATAGGCTAGTTACTGTGACAGGATCATTGGAAGAACAAATGCGAGCAGTATGTCTGATAATGTCAAAGTTAGCAGAAGATGCTCATTACCCGCAGTCAATGAATTCACCCTTTCCGTACGGAGGAGTGAACTACTCTAGTTATCCCTCTCCTTCTGTTGGGTACATGTTACCTTCTGTGCCGTACAATGCAACAAACTATGGGCCCAACGGCGTTGGAGGAAGGCAATCAAGTTCCAAGGGGGCAAATTCTGGAAGGTCACCTGCAGGACCCGCTGATTCTCAAGGAAGCTCGGTGACTTTTGGTGTTGCAGACGAACATATTGGAGCCGTTTTAGGCCGCGGGGGTAGAAACATTATGGAGATTACTCAGATTAGTGGTGCTAAGATTAAAATTTCTGATAGAGGGGATTTCCTGTCTGGCACTTCTGACAGAAAAGTAACGATCACCGGAGCTCCAGAGGCAATTCGTACGGCCGAGGCTTTGATAATGCAAAGGGTTTCTGCTAATTCTGAAAGGTAAGCAACGCTGCTCGATGGTTTATTTTTATCAAGTGATTGCGAGCTGTTGAGATTTTATGGAGCAGAGGGGTAATTTTGCAAAAATAGAAATTAGAGGGTGTAAATACTTCGTATGCGTATTTGCAAATTTAGATAGAAAAACGGGCATGCTAGTTCGTTGGTAAAACACAAGTGTTGTATGTTGCACGTATTATATTATTTATTTTTTGATATCTGTTGAGCTTCATTTAATGTATGTATGTATGTTATAATTTGAAATTAAATTATACATTATCTACTATGATGAATAAGATATGATGCTCAAAAAATACTCCAAAATGCTTGAAATTATGCTCAGGCGATGTAGCGAACGTGTGGTTTC

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00013.28	KH_1	36	102	1.50E-15
PF00013.28	KH_1	120	185	2.60E-14
PF00013.28	KH_1	264	329	6.80E-15

Protein Sequence

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
--	--	--	--

GO term	Ontology	Name
GO:0003723	Molecular Function	RNA binding
GO:0003676	Molecular Function	nucleic acid binding

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	81.980
SRP064423	SRR2545915	Juvenile tuber	87.180
SRP108465	SRR5643513	five period of Gastrodia elata	58.000
	SRR5643514	five period of Gastrodia elata	45.410
	SRR5643515	five period of Gastrodia elata	51.290
	SRR5643524	five period of Gastrodia elata	48.860
	SRR5643525	five period of Gastrodia elata	33.020
	SRR5643528	five period of Gastrodia elata	39.230
	SRR5643658	five period of Gastrodia elata	32.960
	SRR5643659	five period of Gastrodia elata	69.230
	SRR5643660	five period of Gastrodia elata	65.030
	SRR5643661	five period of Gastrodia elata	66.310
	SRR5643662	five period of Gastrodia elata	65.300
	SRR5643663	five period of Gastrodia elata	61.410
	SRR5643664	five period of Gastrodia elata	58.360
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	52.260
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	60.250
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	55.760
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	55.970
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	55.330
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	56.620
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	52.890
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	51.870
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	53.280
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	51.900
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	55.430
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	55.430
SRP279888	Gastro	Gastrodia elata tuber	81.41
	Juven	Juvenile tuber	81.19
	Mother_Gastro	Mother tuber of Gastrodia elata	44.30
	Mother_Juven	Mother tuber of Juvenile	72.85