Detail information of GWHGAAEX001029/evm.TU.scaffold_104.48


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743757984|ref|XP_010924476.1|2.43E-73PREDICTED: B3 domain-containing protein Os11g0197600-like isoform X6 [Elaeis guineensis]
Swissprottr|Q2R9D2|Y1176_ORYSJ3.00E-57B3 domain-containing protein Os11g0197600
trEMBLtr|C5Y728|C5Y728_SORBI7.00E-58Putative uncharacterized protein Sb05g006090 {ECO:0000313|EMBL:EES09476.1}
TAIRAT4G332801.00E-18AP2/B3-like transcriptional factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010313106311321513+
Transcript Sequence

Network for GWHGAAEX001029

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02362.20B3181081.90E-14
PF02362.20B32613481.90E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyB3

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.050
SRR2545915Juvenile tuber29.820
SRP108465SRR5643513five period of Gastrodia elata29.070
SRR5643514five period of Gastrodia elata29.820
SRR5643515five period of Gastrodia elata27.250
SRR5643524five period of Gastrodia elata28.720
SRR5643525five period of Gastrodia elata41.160
SRR5643528five period of Gastrodia elata31.300
SRR5643658five period of Gastrodia elata36.300
SRR5643659five period of Gastrodia elata31.920
SRR5643660five period of Gastrodia elata32.420
SRR5643661five period of Gastrodia elata33.350
SRR5643662five period of Gastrodia elata30.160
SRR5643663five period of Gastrodia elata31.140
SRR5643664five period of Gastrodia elata27.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.560
SRR6049655Rhizomagastrodiae_C368-T10_good_168.260
SRR6049656Rhizomagastrodiae_C368-T07_good_143.540
SRR6049657Rhizomagastrodiae_C368-T07_good_141.110
SRR6049658Rhizomagastrodiae_C368-T04_good_151.110
SRR6049659Rhizomagastrodiae_C368-T04_good_151.500
SRR6049660Rhizomagastrodiae_C368-T01_good_148.780
SRR6049661Rhizomagastrodiae_C368-T04_good_146.420
SRR6049662Rhizomagastrodiae_C368-T01_good_148.690
SRR6049663Rhizomagastrodiae_C368-T01_good_150.180
SRR6049664Rhizomagastrodiae_C368-T10_good_152.310
SRR6049665Rhizomagastrodiae_C368-T10_good_152.310
SRP279888GastroGastrodia elata tuber 33.24
JuvenJuvenile tuber42.23
Mother_GastroMother tuber of Gastrodia elata 29.16
Mother_JuvenMother tuber of Juvenile 24.96