Detail information of GWHGAAEX001030/evm.TU.scaffold_104.49


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743853916|ref|XP_010940761.1|5.67E-12PREDICTED: transcriptional regulator SUPERMAN-like [Elaeis guineensis]
Swissprottr|Q9SR34|TAC1_ARATH3.00E-09Transcriptional regulator TAC1
trEMBLtr|V4TA07|V4TA07_9ROSI9.00E-12Uncharacterized protein {ECO:0000313|EMBL:ESR57123.1}
TAIRAT3G538205.00E-10C2H2 and C2HC zinc fingers superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010313419171342204+
Transcript Sequence

Network for GWHGAAEX001030

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.260
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata31.020
SRR5643514five period of Gastrodia elata44.560
SRR5643515five period of Gastrodia elata15.180
SRR5643524five period of Gastrodia elata37.110
SRR5643525five period of Gastrodia elata5.260
SRR5643528five period of Gastrodia elata6.560
SRR5643658five period of Gastrodia elata8.390
SRR5643659five period of Gastrodia elata0.790
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.540
SRR6049655Rhizomagastrodiae_C368-T10_good_155.780
SRR6049656Rhizomagastrodiae_C368-T07_good_125.910
SRR6049657Rhizomagastrodiae_C368-T07_good_116.970
SRR6049658Rhizomagastrodiae_C368-T04_good_142.820
SRR6049659Rhizomagastrodiae_C368-T04_good_123.160
SRR6049660Rhizomagastrodiae_C368-T01_good_121.600
SRR6049661Rhizomagastrodiae_C368-T04_good_115.360
SRR6049662Rhizomagastrodiae_C368-T01_good_135.830
SRR6049663Rhizomagastrodiae_C368-T01_good_130.900
SRR6049664Rhizomagastrodiae_C368-T10_good_186.990
SRR6049665Rhizomagastrodiae_C368-T10_good_186.990
SRP279888GastroGastrodia elata tuber 0.75
JuvenJuvenile tuber0.93
Mother_GastroMother tuber of Gastrodia elata 3.01
Mother_JuvenMother tuber of Juvenile 1.01