Gene detail

Detail information of GWHGAAEX001034/evm.TU.scaffold_104.55

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|70606674\|ref\|YP_255544.1\|	4.00E-91	inorganic phosphate transporter [Sulfolobus acidocaldarius DSM 639]
KOG	KOG0252	0	Inorganic phosphate transporter
nr	gi\|743835189\|ref\|XP_010935743.1\|	0	PREDICTED: inorganic phosphate transporter 1-4-like [Elaeis guineensis]
Swissprot	tr\|Q8H6H0\|PHT16_ORYSJ	0	Inorganic phosphate transporter 1-6
trEMBL	tr\|A0A096RTM1\|A0A096RTM1_MAIZE	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GRMZM2G112377_P01}
TAIR	AT2G38940	0	phosphate transporter 1;4

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000103	1505271	1506900	+

Transcript Sequence
>GWHTAAEX001034 ATGGCTAAGCAGCAGCAGCAGCTGGAGGTCCTGAACGCCCTCGACGTGGCTAAGACGCAATGGTACCACTTCACCGCGATCGTGATCGCCGGAATGGGCTTCTTCACCGACGCATACGACCTCTTCTGCATCTCCCTCGTGACGAAGCTTCTCGGCAGGATCTACTACCGCATGGACGGCTCCCCGACTCCGGGCTCCCTCCCCCCTCACGTCTCCGCCGCCGTCAACGGCGTGGCCCTATGCGGCACCCTCAGCGGCCAGCTCTTCTTCGGCTGGCTGGGAGACAAGATGGGCCGGAAGCGGGTCTACGGCATGACCCTCATGCTCATGGTCGTCTGCTCCCTCTGCTCCGGCCTCTCCTTCGGCCACACCCCCAAATCCGTGATGGCGACCCTCTGCTTCTTCCGCTTCTGGCTCGGCTTCGGCATCGGCGGTGACTACCCCCTCTCCGCCACCATCATGTCCGAGTACGCCAACAAGAAGACCCGCGGAGCGTTCATTGCCGCCGTCTTCGCGATGCAGGGCTTCGGCATTCTCGCAGGCGGAGCGGTCGCCATTGCCGTCTCCTCGGCCTTCAAGAGCTGGTTCCCCGCCCCTGCCTACGCGGCCGATCCCGCGGCCTCCACCGCTCCGGAGGCGGACTTCGTCTGGCGGATCATCCTCATGGCCGGCGCGCTCCCCGCCGCCCTCACCTTCTACTCCCGAATGAAGATGCCGGAGACCGCCCGGTACACCGCCCTCGTTGCAAAGAACGCGAAGCAGGCTGCCGCCGACATGTCCAAGGTTCTCCAAGTCGAAATCGAGGCGGAGGAGCAGAGCAAATCAGAGAGCGACAGCTTCGGGCTATTTTCGAAGGAGTTCGTCCGGCGGCACGGGCTACACTTGGTGGGCACAGCGTCTACCTGGTTCCTCCTCGACATCGCGTTCTACAGCCAGAACCTGTTCCAGAAGGACATCTTCAGCGCCGTCGGGTGGCTCCCGAAGGCCGCGACGATGAGCGCGCTGGAGGAGGTCTACAGAATTGCGCGGGCGCAGACGCTGATCGCGCTGTGCGGGACGGTGCCGGGGTACTGGTTCACAGTCGGGCTCATAGACGTGGTGGGGAGATTCAGCATACAGATAATGGGGTTCGGAATGATGACTCTGTTCATGCTAGGCCTGGCGATCCCTTACGGCCATTGGACCACCCCGGGGAACCACATCGGCTTCGTCGTGATGTACGGGCTCACCTTTTTCTTTGCGAATTTCGGGCCGAACAGCACGACGTTCGTCGTGCCGGCGGAGATTTTTCCGGCAAGGTTGAGGTCGACCTGCCACGGGATGTCGGCTGCGGCAGGGAAGCTGGGGGCGATCGTCGGCTCGTTCGGATTCTTGTACCTGGCGCAGAATCCCAACCCGGCGCTTGCGGACCGCGGCTACCCTCCCGGCATTGGCGTTAGGAACTCGCTCTTCCTCCTCGCCGCGTGCAATCTTCTAGGGCTCTTCTTCACGTTCCTGGTGCCGGAGTCCAAGGGGAAATCGCTCGAAGAAATGTCCCGCGAGAAGGAGGAAACAGTCTGACCTGGATTTTTTATCAATTGGATCTCCCTTGTTAACACACAATGCTGAATGTTTAATTGTTAGTGTTCCC

Network for GWHGAAEX001034

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00083.23	Sugar_tr	27	513	1.10E-44

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055085	Biological Process	transmembrane transport
GO:0006817	Biological Process	phosphate ion transport
GO:0022857	Molecular Function	transmembrane transporter activity
GO:0005315	Molecular Function	inorganic phosphate transmembrane transporter activity
GO:0016021	Cellular Component	integral component of membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.000
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	0.000
	SRR5643514	five period of Gastrodia elata	0.070
	SRR5643515	five period of Gastrodia elata	0.190
	SRR5643524	five period of Gastrodia elata	0.290
	SRR5643525	five period of Gastrodia elata	0.380
	SRR5643528	five period of Gastrodia elata	0.300
	SRR5643658	five period of Gastrodia elata	0.110
	SRR5643659	five period of Gastrodia elata	0.040
	SRR5643660	five period of Gastrodia elata	0.000
	SRR5643661	five period of Gastrodia elata	0.050
	SRR5643662	five period of Gastrodia elata	0.270
	SRR5643663	five period of Gastrodia elata	0.240
	SRR5643664	five period of Gastrodia elata	0.040
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.040
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.060
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.100
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.040
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.040
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.070
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.100
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.000
SRP279888	Gastro	Gastrodia elata tuber	0.20
	Juven	Juvenile tuber	0.02
	Mother_Gastro	Mother tuber of Gastrodia elata	2.26
	Mother_Juven	Mother tuber of Juvenile	1.28