Detail information of GWHGAAEX001036/evm.TU.scaffold_104.57
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|15899884|ref|NP_344489.1| | 6.00E-86 | phosphate transporter [Sulfolobus solfataricus P2] |
| KOG | KOG0252 | 0 | Inorganic phosphate transporter |
| nr | gi|695008426|ref|XP_009390806.1| | 0 | PREDICTED: probable inorganic phosphate transporter 1-8 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q01MW8|PHT14_ORYSI | 0 | Probable inorganic phosphate transporter 1-4 |
| trEMBL | tr|Q6GUH9|Q6GUH9_MAIZE | 0 | Phosphate transport protein {ECO:0000313|EMBL:AAT51690.1} |
| TAIR | AT5G43360 | 0 | phosphate transporter 1;3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000103 | 1530857 | 1532693 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001036
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00083.23 | Sugar_tr | 27 | 514 | 9.50E-44 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006817 | Biological Process | phosphate ion transport |
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0005315 | Molecular Function | inorganic phosphate transmembrane transporter activity |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.530 |
| SRR2545915 | Juvenile tuber | 2.650 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 12.790 |
| SRR5643514 | five period of Gastrodia elata | 22.370 | |
| SRR5643515 | five period of Gastrodia elata | 37.680 | |
| SRR5643524 | five period of Gastrodia elata | 53.820 | |
| SRR5643525 | five period of Gastrodia elata | 33.590 | |
| SRR5643528 | five period of Gastrodia elata | 24.930 | |
| SRR5643658 | five period of Gastrodia elata | 24.630 | |
| SRR5643659 | five period of Gastrodia elata | 29.820 | |
| SRR5643660 | five period of Gastrodia elata | 19.080 | |
| SRR5643661 | five period of Gastrodia elata | 30.890 | |
| SRR5643662 | five period of Gastrodia elata | 51.890 | |
| SRR5643663 | five period of Gastrodia elata | 32.790 | |
| SRR5643664 | five period of Gastrodia elata | 23.980 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.920 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 3.960 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 3.270 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.260 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 3.180 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.580 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1.850 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 5.830 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 3.470 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.820 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.050 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.050 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 4.94 |
| Juven | Juvenile tuber | 4.55 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 89.04 | |
| Mother_Juven | Mother tuber of Juvenile | 37.52 |