Detail information of GWHGAAEX001047/evm.TU.scaffold_104.71


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|658002092|ref|XP_008393520.1|0PREDICTED: uncharacterized protein LOC103455709 [Malus domestica]
trEMBLtr|M5W9E5|M5W9E5_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ10362.1}
TAIRAT1G733900Endosomal targeting BRO1-like domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010319344861975261-
Transcript Sequence

Network for GWHGAAEX001047

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03097.17BRO1373791.40E-14
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms62.070
SRR2545915Juvenile tuber51.360
SRP108465SRR5643513five period of Gastrodia elata33.120
SRR5643514five period of Gastrodia elata32.580
SRR5643515five period of Gastrodia elata29.510
SRR5643524five period of Gastrodia elata33.570
SRR5643525five period of Gastrodia elata62.040
SRR5643528five period of Gastrodia elata71.020
SRR5643658five period of Gastrodia elata59.820
SRR5643659five period of Gastrodia elata32.550
SRR5643660five period of Gastrodia elata35.030
SRR5643661five period of Gastrodia elata36.410
SRR5643662five period of Gastrodia elata35.110
SRR5643663five period of Gastrodia elata32.860
SRR5643664five period of Gastrodia elata39.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.120
SRR6049655Rhizomagastrodiae_C368-T10_good_123.820
SRR6049656Rhizomagastrodiae_C368-T07_good_126.070
SRR6049657Rhizomagastrodiae_C368-T07_good_133.910
SRR6049658Rhizomagastrodiae_C368-T04_good_130.380
SRR6049659Rhizomagastrodiae_C368-T04_good_136.970
SRR6049660Rhizomagastrodiae_C368-T01_good_132.070
SRR6049661Rhizomagastrodiae_C368-T04_good_130.750
SRR6049662Rhizomagastrodiae_C368-T01_good_121.250
SRR6049663Rhizomagastrodiae_C368-T01_good_124.470
SRR6049664Rhizomagastrodiae_C368-T10_good_124.580
SRR6049665Rhizomagastrodiae_C368-T10_good_124.580
SRP279888GastroGastrodia elata tuber 40.76
JuvenJuvenile tuber44.30
Mother_GastroMother tuber of Gastrodia elata 64.86
Mother_JuvenMother tuber of Juvenile 59.81