Detail information of GWHGAAEX001051/evm.TU.scaffold_104.75


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34076.00E-37Uncharacterized conserved protein
nrgi|695018397|ref|XP_009396161.1|6.23E-61PREDICTED: coiled-coil domain-containing protein 12 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0SN57|M0SN57_MUSAM1.00E-60Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P11920_001}
TAIRAT3G050706.00E-37Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010320486202065786-
Transcript Sequence

Network for GWHGAAEX001051

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08315.11cwf18101863.90E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12871CCDC12 Spliceosome map03040

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.670
SRR2545915Juvenile tuber25.070
SRP108465SRR5643513five period of Gastrodia elata38.370
SRR5643514five period of Gastrodia elata38.880
SRR5643515five period of Gastrodia elata41.960
SRR5643524five period of Gastrodia elata46.830
SRR5643525five period of Gastrodia elata47.700
SRR5643528five period of Gastrodia elata75.010
SRR5643658five period of Gastrodia elata45.000
SRR5643659five period of Gastrodia elata36.660
SRR5643660five period of Gastrodia elata33.300
SRR5643661five period of Gastrodia elata38.230
SRR5643662five period of Gastrodia elata33.000
SRR5643663five period of Gastrodia elata33.010
SRR5643664five period of Gastrodia elata29.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.030
SRR6049655Rhizomagastrodiae_C368-T10_good_139.550
SRR6049656Rhizomagastrodiae_C368-T07_good_127.890
SRR6049657Rhizomagastrodiae_C368-T07_good_123.840
SRR6049658Rhizomagastrodiae_C368-T04_good_129.430
SRR6049659Rhizomagastrodiae_C368-T04_good_128.020
SRR6049660Rhizomagastrodiae_C368-T01_good_125.820
SRR6049661Rhizomagastrodiae_C368-T04_good_124.370
SRR6049662Rhizomagastrodiae_C368-T01_good_131.390
SRR6049663Rhizomagastrodiae_C368-T01_good_133.560
SRR6049664Rhizomagastrodiae_C368-T10_good_144.750
SRR6049665Rhizomagastrodiae_C368-T10_good_144.750
SRP279888GastroGastrodia elata tuber 31.37
JuvenJuvenile tuber27.43
Mother_GastroMother tuber of Gastrodia elata 54.60
Mother_JuvenMother tuber of Juvenile 41.45