Detail information of GWHGAAEX001054/evm.TU.scaffold_104.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|83312989|ref|YP_423253.1|7.00E-131dihydroorotate dehydrogenase 2 [Magnetospirillum magneticum AMB-1]
KOGKOG14360Dihydroorotate dehydrogenase
nrgi|743852325|ref|XP_010940361.1|0PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial isoform X1 [Elaeis guineensis]
Swissprottr|Q7XKC8|PYRD_ORYSJ0Dihydroorotate dehydrogenase (quinone), mitochondrial (Precursor)
trEMBLtr|W9SAT0|W9SAT0_9ROSA0Dihydroorotate dehydrogenase (quinone), mitochondrial {ECO:0000256|RuleBase:RU361255}
TAIRAT5G233000pyrimidine d

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010320831042121334-
Transcript Sequence

Network for GWHGAAEX001054

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01180.20DHO_dh1374563.80E-99
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00254DHODH, pyrD Metabolic pathways map01100
Pyrimidine metabolismmap00240

Gene Ontology

GO term OntologyName
GO:0006207Biological Process'de novo' pyrimidine nucleobase biosynthetic process
GO:0055114Biological Processoxidation-reduction process
GO:0003824Molecular Functioncatalytic activity
GO:0016627Molecular Functionoxidoreductase activity, acting on the CH-CH group of donors
GO:0004152Molecular Functiondihydroorotate dehydrogenase activity
GO:0016020Cellular Componentmembrane
GO:0005737Cellular Componentcytoplasm

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.400
SRR2545915Juvenile tuber9.160
SRP108465SRR5643513five period of Gastrodia elata6.740
SRR5643514five period of Gastrodia elata7.120
SRR5643515five period of Gastrodia elata6.910
SRR5643524five period of Gastrodia elata4.990
SRR5643525five period of Gastrodia elata4.130
SRR5643528five period of Gastrodia elata3.400
SRR5643658five period of Gastrodia elata4.690
SRR5643659five period of Gastrodia elata7.130
SRR5643660five period of Gastrodia elata8.500
SRR5643661five period of Gastrodia elata6.370
SRR5643662five period of Gastrodia elata7.510
SRR5643663five period of Gastrodia elata7.280
SRR5643664five period of Gastrodia elata7.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.870
SRR6049655Rhizomagastrodiae_C368-T10_good_14.620
SRR6049656Rhizomagastrodiae_C368-T07_good_16.430
SRR6049657Rhizomagastrodiae_C368-T07_good_17.660
SRR6049658Rhizomagastrodiae_C368-T04_good_17.060
SRR6049659Rhizomagastrodiae_C368-T04_good_18.840
SRR6049660Rhizomagastrodiae_C368-T01_good_18.410
SRR6049661Rhizomagastrodiae_C368-T04_good_17.240
SRR6049662Rhizomagastrodiae_C368-T01_good_18.170
SRR6049663Rhizomagastrodiae_C368-T01_good_16.720
SRR6049664Rhizomagastrodiae_C368-T10_good_17.460
SRR6049665Rhizomagastrodiae_C368-T10_good_17.460
SRP279888GastroGastrodia elata tuber 9.42
JuvenJuvenile tuber9.56
Mother_GastroMother tuber of Gastrodia elata 6.55
Mother_JuvenMother tuber of Juvenile 7.17