Detail information of GWHGAAEX001058/evm.TU.scaffold_104.82


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672111905|ref|XP_008803062.1|1.08E-135PREDICTED: DNA-binding protein RHL1 [Phoenix dactylifera]
Swissprottr|O81242|RHL1_ARATH2.00E-73DNA-binding protein RHL1
trEMBLtr|M0S0T2|M0S0T2_MUSAM1.00E-124Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P17740_001}
TAIRAT1G483804.00E-72root hair initiation protein root hairless 1 (RHL1)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010322085472239938-
Transcript Sequence

Network for GWHGAAEX001058

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms39.110
SRR2545915Juvenile tuber41.100
SRP108465SRR5643513five period of Gastrodia elata52.420
SRR5643514five period of Gastrodia elata53.190
SRR5643515five period of Gastrodia elata51.080
SRR5643524five period of Gastrodia elata48.630
SRR5643525five period of Gastrodia elata63.750
SRR5643528five period of Gastrodia elata51.180
SRR5643658five period of Gastrodia elata74.150
SRR5643659five period of Gastrodia elata56.500
SRR5643660five period of Gastrodia elata64.890
SRR5643661five period of Gastrodia elata57.890
SRR5643662five period of Gastrodia elata57.640
SRR5643663five period of Gastrodia elata58.960
SRR5643664five period of Gastrodia elata63.600
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_164.580
SRR6049655Rhizomagastrodiae_C368-T10_good_141.490
SRR6049656Rhizomagastrodiae_C368-T07_good_162.480
SRR6049657Rhizomagastrodiae_C368-T07_good_176.490
SRR6049658Rhizomagastrodiae_C368-T04_good_164.230
SRR6049659Rhizomagastrodiae_C368-T04_good_171.390
SRR6049660Rhizomagastrodiae_C368-T01_good_170.790
SRR6049661Rhizomagastrodiae_C368-T04_good_162.130
SRR6049662Rhizomagastrodiae_C368-T01_good_148.840
SRR6049663Rhizomagastrodiae_C368-T01_good_152.950
SRR6049664Rhizomagastrodiae_C368-T10_good_142.780
SRR6049665Rhizomagastrodiae_C368-T10_good_142.780
SRP279888GastroGastrodia elata tuber 68.26
JuvenJuvenile tuber108.73
Mother_GastroMother tuber of Gastrodia elata 53.72
Mother_JuvenMother tuber of Juvenile 77.58