Detail information of GWHGAAEX001076/evm.TU.scaffold_104.101


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392383106|ref|YP_005032303.1|4.00E-964-hydroxybenzoate-octaprenyl transferase [Azospirillum brasilense Sp245]
KOGKOG13815.00E-109Para-hydroxybenzoate-polyprenyl transferase
nrgi|694997782|ref|XP_009401152.1|7.78E-172PREDICTED: 4-hydroxybenzoate polyprenyltransferase, mitochondrial [Musa acuminata subsp. malaccensis]
Swissprottr|Q93YP7|4HPT_ARATH1.00E-1424-hydroxybenzoate polyprenyltransferase, mitochondrial (Precursor)
trEMBLtr|M0S019|M0S019_MUSAM3.00E-172Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P15110_001}
TAIR72990205.00E-109Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010325673662625427+
Transcript Sequence

Network for GWHGAAEX001076

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01040.17UbiA1443873.90E-54
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06125COQ2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Ubiquinone and other terpenoid-quinone biosynthesismap00130

Gene Ontology

GO term OntologyName
GO:0016765Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0004659Molecular Functionprenyltransferase activity
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.650
SRR2545915Juvenile tuber16.370
SRP108465SRR5643513five period of Gastrodia elata11.600
SRR5643514five period of Gastrodia elata13.300
SRR5643515five period of Gastrodia elata11.060
SRR5643524five period of Gastrodia elata11.000
SRR5643525five period of Gastrodia elata10.170
SRR5643528five period of Gastrodia elata10.870
SRR5643658five period of Gastrodia elata10.680
SRR5643659five period of Gastrodia elata15.520
SRR5643660five period of Gastrodia elata14.750
SRR5643661five period of Gastrodia elata15.520
SRR5643662five period of Gastrodia elata14.510
SRR5643663five period of Gastrodia elata15.160
SRR5643664five period of Gastrodia elata15.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.080
SRR6049655Rhizomagastrodiae_C368-T10_good_115.260
SRR6049656Rhizomagastrodiae_C368-T07_good_116.180
SRR6049657Rhizomagastrodiae_C368-T07_good_117.080
SRR6049658Rhizomagastrodiae_C368-T04_good_120.050
SRR6049659Rhizomagastrodiae_C368-T04_good_120.580
SRR6049660Rhizomagastrodiae_C368-T01_good_117.010
SRR6049661Rhizomagastrodiae_C368-T04_good_116.610
SRR6049662Rhizomagastrodiae_C368-T01_good_119.420
SRR6049663Rhizomagastrodiae_C368-T01_good_117.820
SRR6049664Rhizomagastrodiae_C368-T10_good_117.110
SRR6049665Rhizomagastrodiae_C368-T10_good_117.110
SRP279888GastroGastrodia elata tuber 23.67
JuvenJuvenile tuber19.41
Mother_GastroMother tuber of Gastrodia elata 15.35
Mother_JuvenMother tuber of Juvenile 17.42