Gene detail

Detail information of GWHGAAEX001082/evm.TU.scaffold_104.109

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|284165287\|ref\|YP_003403566.1\|	9.00E-66	PfpI family intracellular protease [Haloterrigena turkmenica DSM 5511]
KOG	KOG2764	0	Putative transcriptional regulator DJ-1
nr	gi\|672112132\|ref\|XP_008804207.1\|	0	PREDICTED: protein DJ-1 homolog D isoform X1 [Phoenix dactylifera]
Swissprot	tr\|Q9M8R4\|DJ1D_ARATH	0	Protein DJ-1 homolog D
trEMBL	tr\|I1J382\|I1J382_BRADI	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:BRADI5G25750.1}
trEMBL	tr\|I1J382\|I1J382_BRADI	7.00E-67	Uncharacterized protein {ECO:0000313\|EnsemblPlants:BRADI5G25750.1}
trEMBL	tr\|I1J382\|I1J382_BRADI	2.00E-59	Uncharacterized protein {ECO:0000313\|EnsemblPlants:BRADI5G25750.1}
TAIR	AT3G02720	0	Class I glutamine amidotransferase-like superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000103	2920828	2970335	+

Transcript Sequence
>GWHTAAEX001082 ATGGTGCACGCGCAGGCGATGGTTCCTTTCCAAGCGCTGCAAGCTTATGGAATAGCAGTAGATGCAGTTTGCCCAGGAAAGAAAGCCGGAGAGATGTGCAGGACAGCCGTGCATCAGATGCTGCAGCATCAGACATATTCCGAATCTCGAGGCCATAATTTTGCACTTAATGCGGCATTTGAAGAGATTGAAGTGAGTAACTATAATGGATTAGTTATACCTGGCGGAAGAGCTCCTGAGTACCTTGCCATGGATGAATCCGTCTTAAAAGTAGTGAGGGAATTTTCCAACTCAGGAAAGGCAATTTCAGCCGTTTGTCATGGACAGATGATCTTAGCTGCTGCAGGCATTGTGAAAGGCCGGAGGTGTACAGCTTTTCCTTCTGTTAAGCCTGATCTGATTGCTGCAGGTTCTTATTGGGTAGAAGCAGAGACTATGGCTACATGTGTGAGGGATGGTAATCTTGTAACAGGAGCAACATATGAAGGGCATCCTGAACTTATTCGGCTGTTTGTAGAAGCACTTGGTGGGATCATACAAGGTTCCAACAAGTCGATTCTTTTTCTATGCGGGGACTACATGGAAGATTATGAAGTTATGGTTCCTTTTCAGTCATTTAGTGCTCTTGGTTGCAAGGTTGATGCTGTCTGCCCTAACAAGAATGCGGGTGATATATGTCCAACAGCTATTCATGATTTTGAAGGAGATCAAACATACAGTGAAAAGCCTGGTCATAATTTCAAGCTGAACGAGCGGTTTGATTCTGTGGATATCTCTAGTTATGACGCTCTTGTAATTCCAGGAGGGCGTTCCCCAGAGTATCTAGCACTAGATATAAAGGTTATTGATTTAGTGAAGCAGTTCATGGATAGTACAAAGCCAGTTGCTTCTATTTGCCATGGCCAACAAATACTATCTGCTGCTGGAGTGCTCAAGGGAAGAAAATGCACTGCGTACCCTGCAGTAAAGCTGAATGTGATTCTGGCAGGGGGAACATGGCTGGAACCGGATCCAATCTTCCGCTGCTTCACTGATGGCAATTTATTTGAGCCAGAATCAGCGTTCATACGAGATTTAACGGTTGATTCCAACGCAATGTTGCTAAATTCAACTACCATTTTCAGCGGTCGATTCCAGCGGGAATCGGCCGTTGAATCCCGCTGGAACACCGATTCTGGCCCAAACTTAACGGAAGAGGACGTTAACCTAATAAAAGCAGTATTTACCTCTTACTCTTCACCTAAGAAAAGCATTGTCGATATTAGTTGTCGTCTGACTGCTCGTTGGCTATCGTTGGCCATGGTTGGCTACCGTGAATACCGGATAACTTCGTTGGCTATCGTTGGCCATTGTTGGCTACCGTCAATACCGGATAACTTCGCTGGCCATTGTTGGCTACCGTCAATACAGGATAACTTTATCTTGAGCAACTTCATCCCTAGATATATTATTCAGCAGCCTTTCTCCTACAAAATCATCAACTTCTACAGCTAGTCTTACCCAATAAATATTTGAACAAATCAATAAAATATGGCCATAAGAAATCATTGCAAAATTTATAAGAAATAAAGTATTAAAAATTGTATGGTAAATTATGAAAAAATATATTAAACTCGATCTCTTCTATCGTTTTAAATTCTTGAATCCATCAAATACACATTTATAGGCACTAATTAATGATAAATTGCATATTCGCCAAATAAATATAAGAATTAAAGAACTACAAATAAAATTTAAGAACTAAAATTGTACCCAAAAAAATTAAAAAAATGCAAATAAACAATAAGCAAATGCATAACTCTGCAATTATGCATAAAAGAATATATTAAGACTTAGTATCACTAGATAGGGTTAGTTACATAAATCTTATATTTTTATTGTGCATGATCAAAT

Network for GWHGAAEX001082

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01965.23	DJ-1_PfpI	6	173	2.70E-43
PF01965.23	DJ-1_PfpI	184	348	1.70E-47

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K18881	DJ1D	Metabolic pathways	map01100
		Microbial metabolism in diverse environments	map01120
		Pyruvate metabolism	map00620

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	21.290
SRP064423	SRR2545915	Juvenile tuber	34.160
SRP108465	SRR5643513	five period of Gastrodia elata	45.520
	SRR5643514	five period of Gastrodia elata	67.470
	SRR5643515	five period of Gastrodia elata	46.000
	SRR5643524	five period of Gastrodia elata	53.250
	SRR5643525	five period of Gastrodia elata	24.870
	SRR5643528	five period of Gastrodia elata	19.700
	SRR5643658	five period of Gastrodia elata	19.250
	SRR5643659	five period of Gastrodia elata	45.260
	SRR5643660	five period of Gastrodia elata	46.800
	SRR5643661	five period of Gastrodia elata	42.710
	SRR5643662	five period of Gastrodia elata	40.460
	SRR5643663	five period of Gastrodia elata	42.040
	SRR5643664	five period of Gastrodia elata	44.630
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	39.110
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	19.720
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	39.110
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	37.000
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	18.360
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	15.040
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	28.520
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	23.940
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	51.170
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	31.590
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	44.820
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	44.820
SRP279888	Gastro	Gastrodia elata tuber	40.68
	Juven	Juvenile tuber	39.88
	Mother_Gastro	Mother tuber of Gastrodia elata	13.09
	Mother_Juven	Mother tuber of Juvenile	18.69