Detail information of GWHGAAEX001085/evm.TU.scaffold_104.113


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13643.00E-160Predicted ubiquitin regulatory protein, contains UAS and UBX domains
nrgi|672112150|ref|XP_008804300.1|0PREDICTED: UBX domain-containing protein 7 [Phoenix dactylifera]
trEMBLtr|M0S014|M0S014_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P15060_001}
TAIRAT1G145703.00E-160UBX domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010330139803029269-
Transcript Sequence

Network for GWHGAAEX001085

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14555.5UBA_413522.00E-10
PF13899.5Thioredoxin_71662461.60E-12
PF00789.19UBX3634322.50E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms53.300
SRR2545915Juvenile tuber40.400
SRP108465SRR5643513five period of Gastrodia elata54.900
SRR5643514five period of Gastrodia elata50.790
SRR5643515five period of Gastrodia elata54.880
SRR5643524five period of Gastrodia elata54.920
SRR5643525five period of Gastrodia elata107.430
SRR5643528five period of Gastrodia elata74.960
SRR5643658five period of Gastrodia elata106.380
SRR5643659five period of Gastrodia elata63.610
SRR5643660five period of Gastrodia elata85.240
SRR5643661five period of Gastrodia elata72.800
SRR5643662five period of Gastrodia elata68.850
SRR5643663five period of Gastrodia elata66.760
SRR5643664five period of Gastrodia elata69.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_157.640
SRR6049655Rhizomagastrodiae_C368-T10_good_156.700
SRR6049656Rhizomagastrodiae_C368-T07_good_156.140
SRR6049657Rhizomagastrodiae_C368-T07_good_168.070
SRR6049658Rhizomagastrodiae_C368-T04_good_161.820
SRR6049659Rhizomagastrodiae_C368-T04_good_169.640
SRR6049660Rhizomagastrodiae_C368-T01_good_166.740
SRR6049661Rhizomagastrodiae_C368-T04_good_160.710
SRR6049662Rhizomagastrodiae_C368-T01_good_153.360
SRR6049663Rhizomagastrodiae_C368-T01_good_158.040
SRR6049664Rhizomagastrodiae_C368-T10_good_152.470
SRR6049665Rhizomagastrodiae_C368-T10_good_152.470
SRP279888GastroGastrodia elata tuber 65.17
JuvenJuvenile tuber67.61
Mother_GastroMother tuber of Gastrodia elata 81.50
Mother_JuvenMother tuber of Juvenile 72.27