Detail information of GWHGAAEX001095/evm.TU.scaffold_104.123
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|311109227|ref|YP_003982080.1| | 4.00E-13 | glutaredoxin [Achromobacter xylosoxidans A8] |
| KOG | KOG1752 | 1.00E-45 | Glutaredoxin and related proteins |
| nr | gi|743853544|ref|XP_010940680.1| | 1.66E-69 | PREDICTED: monothiol glutaredoxin-S10 [Elaeis guineensis] |
| Swissprot | tr|Q0J3L4|GRS10_ORYSJ | 2.00E-58 | Monothiol glutaredoxin-S10 |
| trEMBL | tr|M0RYX4|M0RYX4_MUSAM | 2.00E-58 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P11150_001} |
| TAIR | AT2G20270 | 1.00E-45 | Thioredoxin superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000103 | 3322723 | 3332222 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001095
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00462.23 | Glutaredoxin | 146 | 209 | 7.70E-15 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0045454 | Biological Process | cell redox homeostasis |
| GO:0015035 | Molecular Function | protein disulfide oxidoreductase activity |
| GO:0009055 | Molecular Function | electron carrier activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 49.510 |
| SRR2545915 | Juvenile tuber | 58.320 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 73.900 |
| SRR5643514 | five period of Gastrodia elata | 91.110 | |
| SRR5643515 | five period of Gastrodia elata | 85.040 | |
| SRR5643524 | five period of Gastrodia elata | 78.130 | |
| SRR5643525 | five period of Gastrodia elata | 90.990 | |
| SRR5643528 | five period of Gastrodia elata | 203.730 | |
| SRR5643658 | five period of Gastrodia elata | 83.980 | |
| SRR5643659 | five period of Gastrodia elata | 91.030 | |
| SRR5643660 | five period of Gastrodia elata | 131.580 | |
| SRR5643661 | five period of Gastrodia elata | 93.200 | |
| SRR5643662 | five period of Gastrodia elata | 157.020 | |
| SRR5643663 | five period of Gastrodia elata | 94.170 | |
| SRR5643664 | five period of Gastrodia elata | 117.470 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 70.160 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 82.080 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 73.940 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 58.310 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 85.960 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 71.730 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 89.220 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 59.770 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 106.790 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 158.560 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 86.840 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 86.840 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 133.22 |
| Juven | Juvenile tuber | 69.20 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 423.35 | |
| Mother_Juven | Mother tuber of Juvenile | 313.36 |