Gene detail

Detail information of GWHGAAEX001097/evm.TU.scaffold_104.125

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|428201537\|ref\|YP_007080126.1\|	4.00E-27	transcription activator [Pleurocapsa sp. PCC 7327]
nr	gi\|743836394\|ref\|XP_010936080.1\|	0	PREDICTED: uncharacterized protein LOC105055788 [Elaeis guineensis]
trEMBL	tr\|M0S1I9\|M0S1I9_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P20310_001}
TAIR	AT5G32470	7.00E-178	Haem oxygenase-like, multi-helical

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000103	3465932	3479911	-

Transcript Sequence
>GWHTAAEX001097 GTCCGAACTGCCTGCTCTTTAGCTGCCTTCCCTATAAATCAGATGTCCCCGTCGCCGGTCAATCAATCCTTGGCAATTCCCATTTCACTACATATTGCCCGTTCATGCGACTCCCTTTCCCCCTTGCCCTCGTCTCCCACCGAAACCCTAATCACACATATCTCCTCACCCGTTTCGTAAGACCTTTTTCTCGGTCCTTACTCGGATTGAGCCATCTTTCTTCCAGCCGTCCCTGTCGTCTTCTGCCGCAGAGATTCTGCTTTGTCGTTCTGCCGAATCTGCGAGGTCGTCCTGCCGAATCTTCGTGTCTGTCCAGGCGGTTCGCGGCTGAGTCAGGTTCGGCCTCTTCTTCGCCTCCTGTTGGGAGAGCCATGGCTGCGGTGGCTGCTAGCATGGCCGAGGAGGCCATTTCGCCTGCTAAGACTTTCTGGCTGGAGTCCCAGAAGGAGGCTATGCTCGCTAAGTACACCCCATTTGTTGTCTGCTTAGCGTCGGGGAAACTTGAGCAGGAAACGTTCCAGCACTACATTGCTCAAGATGTTCAATTTCTCGTTTCGTATTCCAGCGCGTACGAGAAAGCCAAAGAGTATTCTGATGATGATGATGCCAAGGCTGTATTATCTAAATTACAGAGTGCTATTTTGGAGGAGTTAAAGATGCACAACTCTATTGTTCAAGATTTGGAAGTTGGCCAAAGCGAAGAGGTCCCACCTAACCCTGCAACAGTTAGGTATACAAACTTTTTGGCTGCCACATCTGACGGAAAAATTGAAGTAGGAAAGGGTGTGGGCAAAATTGTCACTCCTTTTGAGAAGACAAAAGTTGCTGCTTATATAGTAGGTGCGGTGGTTCCCTGCATGAGACTTTATGCCTTCCTTGGCAAAGAGCTTGAACCGTTACTATGTCTAAATGGAAGCTCTCATCCCTACACCAGCTGGGTGAAAAACTATTCCCCCTCAAATTTTGAGGAAGTTGCTGCATGCATAGAAGACCTACTAGACAAACTGAGTGTTCCTCTGACTGGAGAGGAGCTGGATGTCATACAAAAGCTCTATCACCAAGCCATGAAACTTGAGATCGACTTCTTTTTAGCGCAGCCTATTTCTCAGCCTTCTGTAGTGCCATTGTCAAAGCTGCATGATCCCAAGAATCGGCTTTTTGTGTTTTCTGATTTTGATTTGACTTGCACAGTTCTTGATTCCTGTGCAATTTTAGCAGAAGTTGGGATTATAAAGGCTGGAAACACTTCTAATCTCACTGTTGCTGCTGATCAAATGTCCTCTTCCGAACTAAGAAATATTTGGAAGGGTTTATCTGGACAATACACTGAGGAGCACGAGCAGTGCATAGAGAGGTTGCTGTCATCCGAAGAAGCCAAGGCATTCACTCCGGAGGACCTTTGCAAGCGCCTGGAGCAGCTGTCAAACTTTGAGAAAAGGGCAAACTCTAGAGTCGTTGAATCAGGAGTGCTGAAGGGAATGGATGTTGATGATATAAAACGTGCAGGAGAACATTTAAATCTTCAAGATGGTTGTTCAGCCTTTTTCCAGAAACTCGCTGGGTTGAAGGAGACTCTCCACGCAGAAATTCATATACTTTCAGTCTGCTGGAGTGCGGATCTCATAAGGTCTGCCTTTACCTCAGCTGGCTGTATCGGTGATGTGGATATACATGCGAACGAACTGGAATACACAGAGGGTGTTACAACGGGGGAGATTGCGAGGAAGATGGAGTCTCCTATAGACAAGGTGAGGGTCTTCAGGAGCATAACTGCAGAAGAAAGCGGGGAAACAGTGTACATAGGGGACTCAGTTGGGGACCTGCTTTGCTTGTTGGAGGCGGACATAGGCATAGTGTTGGGGTCCAGCGAGAGCTTGAGGAGGCTGGGGAAGCGGTTCGGGATTTCCTTCATCCCGCTCTTTGAGGGGTTGGTTCATAAGCAGAGAGAGTTTGGGGCGGACGGCTCCCTGCTCTGGAAATCCAAGCCCGGGGTTCTCTACACCGTCTCCAACTGGTCGGAGATACAGGCGTTCATTCTGGGGCATGAACCTTCTTGACGGCTGCCTCTTATCCAGTGGCATTTTTTTTTTTCAAGACGAGCCACTTGTCCTCTATTATTTCCCTCCTTCATGTCAGGTGCTTGGTTTTTATTTATTTTTTTGGCCCAGCACACCGAGCCATGGTTTTATTCTCGGGGCATTCATATATACATAATATATATAGCAGTGTGATGTGAAGATATAATTATGTTTATTGTTGTAAAGATTTATGCGATGATGGATAGGCTCACCCGCTCATTATCTGTATGCGGGCTGCATTTGATAGATGTTGTATGTTTAGATGTCTGTCTTCGGCTATTTTTCTTTTAAGCTTCTTGATTTTGGATGGATTCTGGAAATTCCATTTAGCTATATGGATTCTGCCTTTTAGTTTTGCTCTAATGACTTCAGATTTTATGGTTATTGGTCCCCTATAATAAGCATTGGGGATGTTCAGTATTGCATAGTTTTAGTTTCTACGTTTCTGTATAGTTCGAAATGTCTAAACTTATAAATTATTGAGCTTTTTCTATGGTTGTTAGAAATTGAGATATTTGCTAACAAGATGGAGATTATTTTGGGACTATGT

Network for GWHGAAEX001097

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03070.15	TENA_THI-4	123	218	1.60E-10
PF03070.15	TENA_THI-4	239	328	2.20E-05

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K22911	TH2	Metabolic pathways	map01100
K22911	TH2	Thiamine metabolism	map00730

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.300
SRP064423	SRR2545915	Juvenile tuber	17.620
SRP108465	SRR5643513	five period of Gastrodia elata	21.650
	SRR5643514	five period of Gastrodia elata	18.510
	SRR5643515	five period of Gastrodia elata	26.000
	SRR5643524	five period of Gastrodia elata	20.940
	SRR5643525	five period of Gastrodia elata	24.180
	SRR5643528	five period of Gastrodia elata	33.180
	SRR5643658	five period of Gastrodia elata	29.630
	SRR5643659	five period of Gastrodia elata	20.900
	SRR5643660	five period of Gastrodia elata	21.070
	SRR5643661	five period of Gastrodia elata	22.470
	SRR5643662	five period of Gastrodia elata	25.120
	SRR5643663	five period of Gastrodia elata	23.820
	SRR5643664	five period of Gastrodia elata	20.810
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	17.220
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	15.740
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.250
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	15.120
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	18.650
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	18.250
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	18.650
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	15.900
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	22.470
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	23.010
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	20.010
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	20.010
SRP279888	Gastro	Gastrodia elata tuber	17.90
	Juven	Juvenile tuber	17.89
	Mother_Gastro	Mother tuber of Gastrodia elata	54.28
	Mother_Juven	Mother tuber of Juvenile	53.22