Detail information of GWHGAAEX001105/evm.TU.scaffold_105.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743771819|ref|XP_010916199.1|2.28E-97PREDICTED: uncharacterized protein LOC105041096 isoform X1 [Elaeis guineensis]
trEMBLtr|A0A0A0LQX9|A0A0A0LQX9_CUCSA2.00E-88Uncharacterized protein {ECO:0000313|EMBL:KGN64188.1}
TAIRAT1G677802.00E-15Zinc-finger domain of monoamine-oxidase A repressor R1 protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001054479967702-
Transcript Sequence

Network for GWHGAAEX001105

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10497.8zf-4CXXC_R11192415.30E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.890
SRR2545915Juvenile tuber15.740
SRP108465SRR5643513five period of Gastrodia elata20.760
SRR5643514five period of Gastrodia elata22.540
SRR5643515five period of Gastrodia elata20.220
SRR5643524five period of Gastrodia elata23.010
SRR5643525five period of Gastrodia elata14.750
SRR5643528five period of Gastrodia elata13.190
SRR5643658five period of Gastrodia elata13.530
SRR5643659five period of Gastrodia elata25.600
SRR5643660five period of Gastrodia elata27.300
SRR5643661five period of Gastrodia elata20.650
SRR5643662five period of Gastrodia elata22.650
SRR5643663five period of Gastrodia elata24.640
SRR5643664five period of Gastrodia elata19.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.780
SRR6049655Rhizomagastrodiae_C368-T10_good_129.710
SRR6049656Rhizomagastrodiae_C368-T07_good_122.560
SRR6049657Rhizomagastrodiae_C368-T07_good_118.910
SRR6049658Rhizomagastrodiae_C368-T04_good_126.040
SRR6049659Rhizomagastrodiae_C368-T04_good_121.130
SRR6049660Rhizomagastrodiae_C368-T01_good_124.120
SRR6049661Rhizomagastrodiae_C368-T04_good_125.480
SRR6049662Rhizomagastrodiae_C368-T01_good_123.910
SRR6049663Rhizomagastrodiae_C368-T01_good_123.130
SRR6049664Rhizomagastrodiae_C368-T10_good_120.580
SRR6049665Rhizomagastrodiae_C368-T10_good_120.580
SRP279888GastroGastrodia elata tuber 43.14
JuvenJuvenile tuber30.21
Mother_GastroMother tuber of Gastrodia elata 37.13
Mother_JuvenMother tuber of Juvenile 26.66