Detail information of GWHGAAEX001107/evm.TU.scaffold_105.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743800969|ref|XP_010926212.1|5.29E-78PREDICTED: WW domain-binding protein 11-like, partial [Elaeis guineensis]
trEMBLtr|F1DK22|F1DK22_MAIZE2.00E-69Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G041818_P01} (Fragment)
TAIRAT1G617309.00E-13DNA-binding storekeeper protein-related transcriptional regulator

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000105356033357685+
Transcript Sequence

Network for GWHGAAEX001107

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04504.13DUF573931866.20E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGeBP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.050
SRR2545915Juvenile tuber9.270
SRP108465SRR5643513five period of Gastrodia elata10.280
SRR5643514five period of Gastrodia elata9.580
SRR5643515five period of Gastrodia elata10.400
SRR5643524five period of Gastrodia elata10.390
SRR5643525five period of Gastrodia elata17.560
SRR5643528five period of Gastrodia elata18.670
SRR5643658five period of Gastrodia elata13.940
SRR5643659five period of Gastrodia elata11.570
SRR5643660five period of Gastrodia elata12.200
SRR5643661five period of Gastrodia elata11.590
SRR5643662five period of Gastrodia elata14.190
SRR5643663five period of Gastrodia elata9.580
SRR5643664five period of Gastrodia elata10.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.810
SRR6049655Rhizomagastrodiae_C368-T10_good_117.570
SRR6049656Rhizomagastrodiae_C368-T07_good_110.990
SRR6049657Rhizomagastrodiae_C368-T07_good_17.260
SRR6049658Rhizomagastrodiae_C368-T04_good_19.490
SRR6049659Rhizomagastrodiae_C368-T04_good_19.500
SRR6049660Rhizomagastrodiae_C368-T01_good_19.150
SRR6049661Rhizomagastrodiae_C368-T04_good_19.630
SRR6049662Rhizomagastrodiae_C368-T01_good_18.990
SRR6049663Rhizomagastrodiae_C368-T01_good_19.380
SRR6049664Rhizomagastrodiae_C368-T10_good_18.600
SRR6049665Rhizomagastrodiae_C368-T10_good_18.600
SRP279888GastroGastrodia elata tuber 14.97
JuvenJuvenile tuber16.77
Mother_GastroMother tuber of Gastrodia elata 12.71
Mother_JuvenMother tuber of Juvenile 24.90