Detail information of GWHGAAEX001110/evm.TU.scaffold_105.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262198376|ref|YP_003269585.1|2.00E-68trehalose-phosphatase [Haliangium ochraceum DSM 14365]
KOGKOG10502.00E-135Trehalose-6-phosphate synthase component TPS1 and related subunits
nrgi|672117872|ref|XP_008782128.1|4.13E-161PREDICTED: probable trehalose-phosphate phosphatase 6 [Phoenix dactylifera]
Swissprottr|Q6ZAL2|TPP6_ORYSJ1.00E-146Probable trehalose-phosphate phosphatase 6
trEMBLtr|M0RL26|M0RL26_MUSAM2.00E-154Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}
TAIRAT5G101002.00E-135Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000105782196787406+
Transcript Sequence

Network for GWHGAAEX001110

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02358.15Trehalose_PPase903251.70E-67
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01087otsB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005992Biological Processtrehalose biosynthetic process
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.810
SRR2545915Juvenile tuber0.420
SRP108465SRR5643513five period of Gastrodia elata16.440
SRR5643514five period of Gastrodia elata18.400
SRR5643515five period of Gastrodia elata9.960
SRR5643524five period of Gastrodia elata19.670
SRR5643525five period of Gastrodia elata0.440
SRR5643528five period of Gastrodia elata0.330
SRR5643658five period of Gastrodia elata0.440
SRR5643659five period of Gastrodia elata0.850
SRR5643660five period of Gastrodia elata0.980
SRR5643661five period of Gastrodia elata0.290
SRR5643662five period of Gastrodia elata0.060
SRR5643663five period of Gastrodia elata0.090
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_142.280
SRR6049655Rhizomagastrodiae_C368-T10_good_152.200
SRR6049656Rhizomagastrodiae_C368-T07_good_145.670
SRR6049657Rhizomagastrodiae_C368-T07_good_118.650
SRR6049658Rhizomagastrodiae_C368-T04_good_130.910
SRR6049659Rhizomagastrodiae_C368-T04_good_129.290
SRR6049660Rhizomagastrodiae_C368-T01_good_114.210
SRR6049661Rhizomagastrodiae_C368-T04_good_121.980
SRR6049662Rhizomagastrodiae_C368-T01_good_133.700
SRR6049663Rhizomagastrodiae_C368-T01_good_126.810
SRR6049664Rhizomagastrodiae_C368-T10_good_183.470
SRR6049665Rhizomagastrodiae_C368-T10_good_183.470
SRP279888GastroGastrodia elata tuber 1.11
JuvenJuvenile tuber2.45
Mother_GastroMother tuber of Gastrodia elata 3.45
Mother_JuvenMother tuber of Juvenile 6.81