Detail information of GWHGAAEX001112/evm.TU.scaffold_105.22_evm.TU.scaffold_105.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|114570780|ref|YP_757460.1|9.00E-56cytochrome c oxidase assembly protein CtaG/Cox11 [Maricaulis maris MCS10]
KOGKOG25401.00E-108Cytochrome oxidase assembly factor COX11
nrgi|293331433|ref|NP_001170515.1|2.40E-115uncharacterized protein LOC100384526 [Zea mays]
Swissprottr|Q8GWR0|COX11_ARATH4.00E-109Cytochrome c oxidase assembly protein COX11, mitochondrial (Precursor)
trEMBLtr|B6T5S8|B6T5S8_MAIZE9.00E-116Uncharacterized protein {ECO:0000313|EMBL:ACR33935.1, ECO:0000313|EnsemblPlants:GRMZM2G059981_P01}
TAIRAT1G024101.00E-108cytochrome c oxidase assembly protein CtaG / Cox11 family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010515878721631498+
Transcript Sequence

Network for GWHGAAEX001112

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04442.13CtaG_Cox11712253.90E-61
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K02258COX11, ctaG Metabolic pathways map01100
Oxidative phosphorylationmap00190
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0005507Molecular Functioncopper ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.190
SRR2545915Juvenile tuber17.670
SRP108465SRR5643513five period of Gastrodia elata9.770
SRR5643514five period of Gastrodia elata13.540
SRR5643515five period of Gastrodia elata9.560
SRR5643524five period of Gastrodia elata10.010
SRR5643525five period of Gastrodia elata13.940
SRR5643528five period of Gastrodia elata14.880
SRR5643658five period of Gastrodia elata17.220
SRR5643659five period of Gastrodia elata11.900
SRR5643660five period of Gastrodia elata13.000
SRR5643661five period of Gastrodia elata12.680
SRR5643662five period of Gastrodia elata15.790
SRR5643663five period of Gastrodia elata13.440
SRR5643664five period of Gastrodia elata16.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.650
SRR6049655Rhizomagastrodiae_C368-T10_good_119.140
SRR6049656Rhizomagastrodiae_C368-T07_good_114.930
SRR6049657Rhizomagastrodiae_C368-T07_good_111.260
SRR6049658Rhizomagastrodiae_C368-T04_good_110.860
SRR6049659Rhizomagastrodiae_C368-T04_good_111.690
SRR6049660Rhizomagastrodiae_C368-T01_good_19.480
SRR6049661Rhizomagastrodiae_C368-T04_good_111.840
SRR6049662Rhizomagastrodiae_C368-T01_good_110.880
SRR6049663Rhizomagastrodiae_C368-T01_good_111.330
SRR6049664Rhizomagastrodiae_C368-T10_good_112.520
SRR6049665Rhizomagastrodiae_C368-T10_good_112.520
SRP279888GastroGastrodia elata tuber 17.31
JuvenJuvenile tuber19.20
Mother_GastroMother tuber of Gastrodia elata 12.69
Mother_JuvenMother tuber of Juvenile 15.13