Detail information of GWHGAAEX001115/evm.TU.scaffold_105.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|85859932|ref|YP_462134.1|2.00E-28hypothetical protein SYN_00677 [Syntrophus aciditrophicus SB]
KOGKOG18402.00E-64Kinesin light chain
nrgi|672114135|ref|XP_008775552.1|2.86E-156PREDICTED: uncharacterized protein LOC103695884 isoform X2 [Phoenix dactylifera]
trEMBLtr|V4UVW3|V4UVW3_9ROSI2.00E-133Uncharacterized protein {ECO:0000313|EMBL:ESR43844.1}
TAIRAT5G375902.00E-64Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010518012911849926+
Transcript Sequence

Network for GWHGAAEX001115

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13424.5TPR_121331976.20E-10
PF13424.5TPR_122072812.30E-13
PF13374.5TPR_103333690.00058
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.290
SRR2545915Juvenile tuber13.390
SRP108465SRR5643513five period of Gastrodia elata10.260
SRR5643514five period of Gastrodia elata9.920
SRR5643515five period of Gastrodia elata9.330
SRR5643524five period of Gastrodia elata8.860
SRR5643525five period of Gastrodia elata4.030
SRR5643528five period of Gastrodia elata3.440
SRR5643658five period of Gastrodia elata3.820
SRR5643659five period of Gastrodia elata8.810
SRR5643660five period of Gastrodia elata8.030
SRR5643661five period of Gastrodia elata7.430
SRR5643662five period of Gastrodia elata6.980
SRR5643663five period of Gastrodia elata8.040
SRR5643664five period of Gastrodia elata6.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.630
SRR6049655Rhizomagastrodiae_C368-T10_good_19.200
SRR6049656Rhizomagastrodiae_C368-T07_good_19.850
SRR6049657Rhizomagastrodiae_C368-T07_good_111.070
SRR6049658Rhizomagastrodiae_C368-T04_good_110.980
SRR6049659Rhizomagastrodiae_C368-T04_good_18.190
SRR6049660Rhizomagastrodiae_C368-T01_good_110.720
SRR6049661Rhizomagastrodiae_C368-T04_good_112.120
SRR6049662Rhizomagastrodiae_C368-T01_good_18.000
SRR6049663Rhizomagastrodiae_C368-T01_good_18.430
SRR6049664Rhizomagastrodiae_C368-T10_good_19.240
SRR6049665Rhizomagastrodiae_C368-T10_good_19.240
SRP279888GastroGastrodia elata tuber 14.52
JuvenJuvenile tuber14.08
Mother_GastroMother tuber of Gastrodia elata 4.58
Mother_JuvenMother tuber of Juvenile 7.19