Gene detail

Detail information of GWHGAAEX001138/evm.TU.scaffold_105.70

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|72163178\|ref\|YP_290835.1\|	1.00E-77	hypothetical protein Tfu_2779 [Thermobifida fusca YX]
KOG	KOG2142	0	Molybdenum cofactor sulfurase
nr	gi\|695048283\|ref\|XP_009412047.1\|	0	PREDICTED: molybdenum cofactor sulfurase {ECO:0000255\|HAMAP-Rule:MF_03050} [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q655R6\|MOCOS_ORYSJ	0	Molybdenum cofactor sulfurase {ECO:0000255\|HAMAP-Rule:MF_03050}
trEMBL	tr\|B9FQF2\|B9FQF2_ORYSJ	0	Molybdenum cofactor sulfurase {ECO:0000256\|HAMAP-Rule:MF_03050}
TAIR	AT1G16540	0	molybdenum cofactor sulfurase (LOS5) (ABA3)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000105	3364607	3422352	+

Transcript Sequence
>GWHTAAEX001138 ATGGAGCGTGCTAAAAGCCATTTCTTGAAGCGTTTTGGGGACGATTATGGTTACCCTAATGCCCTTAACAACATCGACGAGATGAGGGCTACTGAATTCAAGAGATTGGACGGGCTCGTCTATTTGGATCACGGCGGAGCAACTCTTTACTCAGAAGACCAGTTAGCAGCCATTTTCAGAGACCTGTCAACAAATGTTTATGGGAACCCACATAGTCAGAGTGATTCAAGTCAGGCAACATCTGATGTCATTAGTGAAGCACGCCAGCAGGTTCTTTCTTATTTTAATGCATCTCCGAACGACTACAAATGCTTATTCACTTCTGGAGCGACTGGGGCCTTAAAACTTGTTGGTGAAACTTTTCCTTGGACGAGTGAAAGCTGCTATATGTACACAGTGGAAAATCATAACAGTGTTCTTGGGATAAGAGAGTATCCTGCCAATATCGTAACAGAAAATTTTAATTTCTTAGTTGAACTTCAAAGAGACACAAAACCAGCATTCCATATCAATAAACACTTGACTCAAAGGAGAAGTGATGCCATTTCTTCAAGAGAGATTCAAAATGACAAATGTTTCGGGAATGATTATAATCTGTTTGCTTTCCCATCCGAGTGTAATTTTTCTGGCATGAAATTTTCTCTAGAATTTGTCAACTTTATTAAAGGGAATGCCGGAAAACAAGTTGGAGATTCACTGCAGTGCCGGGGTTCTTGGATTGTCTTGATAGATGCTGCCAAAGGCTGCGCTACTGAACCACCTGATCTTACTAAATACCCAGCTGATTTTGTTGTCTGTTCTTTCTACAAGATGTTTGGTTATCCAACTGGTCTAGGAGCTCTTGTTTTACGAAATGATGCTTCCAAACTTCTCAGTAAAAAATATTTCAGTGGAGGTACTGTGTCTGCTTCCATTTCTGACATTGACTTTGTAAAGAAAAGGGAAAACATTGAGCAGTTATTTGAAGATGGAACTGTTTCATTTTTGGATATAGCTTCCATTCGTCATGGGTTTCATATAATCAATAGATTAACTACGCCTTCTATAGCGAGGCACACGGCTTCTCTTGCTTCATACACTAGGAGCAAGATGCTGGAGTTGAGGCATGAAAATGGGTTGAAACTTTGTTTACTTTATGGGAGAACGGTTGAGAAGGTATATCCTTGTAAGGTGGGCCCTACAATCGCATTTAATTTGAAAAGGCCTGATGGATCTTGGATTGGATATCGTGAAGTAGAAAAAATGGCATCTTTATCTTGTATTCAACTACGGACAGGCTGTTTTTGCAACCCTGGTGCTTGTGCCAAGCTTCTATGTTTATCTCATTCAGATCTTTTTTCCAACCTTGAGAGTGGACATGTTTGTTGGGATGATAGTGATGTGCTACATGGAAAACCAACGGGTGCTGTTAGGATCTCCTTTGGTTATATGTCTACATTTGAGGATGCTGAGGGATAGATTCTTTGGCATCTAATTTCAAAGGTTTCAAAAAAGCCTGAAAAGGGCATTAAAAGGCCAGCAAAAATAAATAAGAGTATTTTTATGAAGAATAGGATTGTGCTGCCACAAAAGAGGGAGGGAATTCAGATGTTAACAAGGAAGACTAGAGGGCTAT

Network for GWHGAAEX001138

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00266.18	Aminotran_5	40	140	7.00E-08
PF00266.18	Aminotran_5	238	482	4.60E-14

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K15631	ABA3	Folate biosynthesis	map00790

Gene Ontology

GO term	Ontology	Name
GO:0003824	Molecular Function	catalytic activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	15.940
SRP064423	SRR2545915	Juvenile tuber	15.090
SRP108465	SRR5643513	five period of Gastrodia elata	6.840
	SRR5643514	five period of Gastrodia elata	7.590
	SRR5643515	five period of Gastrodia elata	7.410
	SRR5643524	five period of Gastrodia elata	6.960
	SRR5643525	five period of Gastrodia elata	6.840
	SRR5643528	five period of Gastrodia elata	4.620
	SRR5643658	five period of Gastrodia elata	6.260
	SRR5643659	five period of Gastrodia elata	8.390
	SRR5643660	five period of Gastrodia elata	6.360
	SRR5643661	five period of Gastrodia elata	7.710
	SRR5643662	five period of Gastrodia elata	7.420
	SRR5643663	five period of Gastrodia elata	8.910
	SRR5643664	five period of Gastrodia elata	10.520
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	9.230
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.870
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	8.060
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.870
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.710
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.170
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.530
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.970
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.070
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	7.220
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.290
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.290
SRP279888	Gastro	Gastrodia elata tuber	11.68
	Juven	Juvenile tuber	10.35
	Mother_Gastro	Mother tuber of Gastrodia elata	6.61
	Mother_Juven	Mother tuber of Juvenile	12.27