Detail information of GWHGAAEX001149/evm.TU.scaffold_106.3
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|427739777|ref|YP_007059321.1| | 8.00E-66 | K+ transport protein [Rivularia sp. PCC 7116] |
| KOG | KOG1399 | 1.00E-104 | Flavin-containing monooxygenase |
| nr | gi|743833372|ref|XP_010935250.1| | 0 | PREDICTED: probable flavin-containing monooxygenase 1 [Elaeis guineensis] |
| Swissprot | tr|Q9LMA1|FMO1_ARATH | 1.00E-121 | Probable flavin-containing monooxygenase 1 |
| trEMBL | tr|W5FR20|W5FR20_WHEAT | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_5DL_1E264D6B4.1} |
| TAIR | AT1G19250 | 1.00E-104 | flavin-dependent monooxygenase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000107 | 174020 | 187779 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001149
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00743.18 | FMO-like | 3 | 500 | 6.30E-41 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00485 | FMO | Drug metabolism - cytochrome P450 | map00982 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0004499 | Molecular Function | N,N-dimethylaniline monooxygenase activity |
| GO:0050661 | Molecular Function | NADP binding |
| GO:0050660 | Molecular Function | flavin adenine dinucleotide binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 5.850 |
| SRR2545915 | Juvenile tuber | 13.880 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.460 |
| SRR5643514 | five period of Gastrodia elata | 2.050 | |
| SRR5643515 | five period of Gastrodia elata | 0.190 | |
| SRR5643524 | five period of Gastrodia elata | 0.970 | |
| SRR5643525 | five period of Gastrodia elata | 0.000 | |
| SRR5643528 | five period of Gastrodia elata | 0.050 | |
| SRR5643658 | five period of Gastrodia elata | 0.000 | |
| SRR5643659 | five period of Gastrodia elata | 0.170 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.000 | |
| SRR5643662 | five period of Gastrodia elata | 0.140 | |
| SRR5643663 | five period of Gastrodia elata | 0.000 | |
| SRR5643664 | five period of Gastrodia elata | 0.000 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 11.480 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 14.520 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 19.100 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 17.540 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 9.400 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 5.920 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 21.780 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 19.270 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 21.240 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 14.100 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 8.870 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 8.870 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.13 |
| Juven | Juvenile tuber | 55.47 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.16 | |
| Mother_Juven | Mother tuber of Juvenile | 4.53 |