Detail information of GWHGAAEX001180/evm.TU.scaffold_106.59


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|694998354|ref|XP_009404140.1|6.22E-120PREDICTED: uncharacterized protein LOC103987533 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0RZB7|M0RZB7_MUSAM4.00E-118Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P12590_001}
TAIRAT1G193308.00E-91Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010732555033260558-
Transcript Sequence

Network for GWHGAAEX001180

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13867.5SAP30_Sin3_bdg1622167.60E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.060
SRR2545915Juvenile tuber25.770
SRP108465SRR5643513five period of Gastrodia elata17.600
SRR5643514five period of Gastrodia elata18.320
SRR5643515five period of Gastrodia elata13.920
SRR5643524five period of Gastrodia elata17.220
SRR5643525five period of Gastrodia elata19.770
SRR5643528five period of Gastrodia elata14.700
SRR5643658five period of Gastrodia elata17.160
SRR5643659five period of Gastrodia elata13.140
SRR5643660five period of Gastrodia elata9.290
SRR5643661five period of Gastrodia elata12.790
SRR5643662five period of Gastrodia elata9.940
SRR5643663five period of Gastrodia elata10.170
SRR5643664five period of Gastrodia elata13.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.770
SRR6049655Rhizomagastrodiae_C368-T10_good_18.820
SRR6049656Rhizomagastrodiae_C368-T07_good_120.730
SRR6049657Rhizomagastrodiae_C368-T07_good_119.690
SRR6049658Rhizomagastrodiae_C368-T04_good_114.380
SRR6049659Rhizomagastrodiae_C368-T04_good_111.780
SRR6049660Rhizomagastrodiae_C368-T01_good_118.170
SRR6049661Rhizomagastrodiae_C368-T04_good_121.260
SRR6049662Rhizomagastrodiae_C368-T01_good_117.800
SRR6049663Rhizomagastrodiae_C368-T01_good_114.480
SRR6049664Rhizomagastrodiae_C368-T10_good_115.470
SRR6049665Rhizomagastrodiae_C368-T10_good_115.470
SRP279888GastroGastrodia elata tuber 18.33
JuvenJuvenile tuber26.95
Mother_GastroMother tuber of Gastrodia elata 12.28
Mother_JuvenMother tuber of Juvenile 11.87