Detail information of GWHGAAEX001184/evm.TU.scaffold_1060.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG35348.00E-29p53 inducible protein PIR121
nrgi|700211138|gb|KGN66234.1|1.68E-40hypothetical protein Csa_1G587450 [Cucumis sativus]
Swissprottr|Q5S2C3|PIR_ARATH2.00E-30Protein PIR
trEMBLtr|A0A0A0LYV1|A0A0A0LYV1_CUCSA6.00E-41Uncharacterized protein {ECO:0000313|EMBL:KGN66234.1}
TAIRAT5G184108.00E-29transcription activators

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000105240714494+
Transcript Sequence

Network for GWHGAAEX001184

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05749CYFIP RNA transport map03013
Regulation of actin cytoskeletonmap04810

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms71.300
SRR2545915Juvenile tuber65.970
SRP108465SRR5643513five period of Gastrodia elata24.630
SRR5643514five period of Gastrodia elata45.730
SRR5643515five period of Gastrodia elata24.840
SRR5643524five period of Gastrodia elata21.810
SRR5643525five period of Gastrodia elata265.430
SRR5643528five period of Gastrodia elata62.910
SRR5643658five period of Gastrodia elata111.190
SRR5643659five period of Gastrodia elata42.200
SRR5643660five period of Gastrodia elata21.110
SRR5643661five period of Gastrodia elata10.740
SRR5643662five period of Gastrodia elata35.400
SRR5643663five period of Gastrodia elata45.460
SRR5643664five period of Gastrodia elata43.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1108.810
SRR6049655Rhizomagastrodiae_C368-T10_good_1210.080
SRR6049656Rhizomagastrodiae_C368-T07_good_1150.360
SRR6049657Rhizomagastrodiae_C368-T07_good_198.370
SRR6049658Rhizomagastrodiae_C368-T04_good_129.070
SRR6049659Rhizomagastrodiae_C368-T04_good_153.480
SRR6049660Rhizomagastrodiae_C368-T01_good_166.660
SRR6049661Rhizomagastrodiae_C368-T04_good_160.170
SRR6049662Rhizomagastrodiae_C368-T01_good_176.960
SRR6049663Rhizomagastrodiae_C368-T01_good_160.430
SRR6049664Rhizomagastrodiae_C368-T10_good_1117.480
SRR6049665Rhizomagastrodiae_C368-T10_good_1117.480
SRP279888GastroGastrodia elata tuber 69.96
JuvenJuvenile tuber313.63
Mother_GastroMother tuber of Gastrodia elata 104.58
Mother_JuvenMother tuber of Juvenile 125.55