Detail information of GWHGAAEX001188/evm.TU.scaffold_107.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|3.00E-46hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
KOGKOG01920Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
nrgi|672189645|ref|XP_008775041.1|0PREDICTED: serine/threonine-protein kinase CTR1 [Phoenix dactylifera]
Swissprottr|Q05609|CTR1_ARATH0Serine/threonine-protein kinase CTR1
trEMBLtr|J9PWU3|J9PWU3_MUSAC0Constitutive triple response 1-like protein {ECO:0000313|EMBL:AFA37962.1}
TAIRAT5G037300Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000106593700641698+
Transcript Sequence

Network for GWHGAAEX001188

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14381.5EDR1452432.60E-67
PF07714.16Pkinase_Tyr4236751.10E-72
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL_CTR1-DRK-2

KEGG pathway

KO Enzyme pathway mapID
K14510CTR1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.660
SRR2545915Juvenile tuber36.230
SRP108465SRR5643513five period of Gastrodia elata18.350
SRR5643514five period of Gastrodia elata19.750
SRR5643515five period of Gastrodia elata18.050
SRR5643524five period of Gastrodia elata23.620
SRR5643525five period of Gastrodia elata16.790
SRR5643528five period of Gastrodia elata21.980
SRR5643658five period of Gastrodia elata27.660
SRR5643659five period of Gastrodia elata17.220
SRR5643660five period of Gastrodia elata16.540
SRR5643661five period of Gastrodia elata18.270
SRR5643662five period of Gastrodia elata24.010
SRR5643663five period of Gastrodia elata18.960
SRR5643664five period of Gastrodia elata20.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.280
SRR6049655Rhizomagastrodiae_C368-T10_good_115.090
SRR6049656Rhizomagastrodiae_C368-T07_good_122.690
SRR6049657Rhizomagastrodiae_C368-T07_good_123.510
SRR6049658Rhizomagastrodiae_C368-T04_good_123.830
SRR6049659Rhizomagastrodiae_C368-T04_good_127.030
SRR6049660Rhizomagastrodiae_C368-T01_good_125.140
SRR6049661Rhizomagastrodiae_C368-T04_good_125.200
SRR6049662Rhizomagastrodiae_C368-T01_good_122.420
SRR6049663Rhizomagastrodiae_C368-T01_good_121.790
SRR6049664Rhizomagastrodiae_C368-T10_good_123.550
SRR6049665Rhizomagastrodiae_C368-T10_good_123.550
SRP279888GastroGastrodia elata tuber 25.05
JuvenJuvenile tuber41.67
Mother_GastroMother tuber of Gastrodia elata 35.05
Mother_JuvenMother tuber of Juvenile 53.12