Gene detail

Detail information of GWHGAAEX001189/evm.TU.scaffold_107.13

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|297569299\|ref\|YP_003690643.1\|	3.00E-41	chaperone DnaJ domain protein [Desulfurivibrio alkaliphilus AHT2]
KOG	KOG0714	2.00E-137	Molecular chaperone (DnaJ superfamily)
nr	gi\|590579281\|ref\|XP_007013743.1\|	2.02E-159	DNAJ heat shock family protein [Theobroma cacao]
Swissprot	tr\|Q9LZK5\|DNJ19_ARATH	5.00E-44	DnaJ protein ERDJ3B (Precursor)
trEMBL	tr\|A0A061GQC8\|A0A061GQC8_THECC	8.00E-160	DNAJ heat shock family protein {ECO:0000313\|EMBL:EOY31362.1}
TAIR	AT5G25530	2.00E-137	DNAJ heat shock family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000106	642641	645912	-

Transcript Sequence
>GWHTAAEX001189 GAGAGAGAGAGAGGAGATAGGAGAGAAGGGCCATACGTTGTTCTTTTGACCGAGAGTCGTTCCGTAAATCATTTGAAAATTTTTTAGGCACATTGCTGCCGTAAGAAAATCTTTTCCGCCTCTTCTTGCGATCTTTTTATTTTGAAACCGGAAATCTTCTTCAACATTTGCTCCTCATTTTCGGCCAATCCCAAAATCTATCGTCTAATCTGTTTTACCCAAGCGAATTTCTCTGTTTTTTATCTTTTTAATTGGATGTTTCAAATTGATCGCCGATTTTTATCTCCACAAGTAATTTTTTCAGCATCGACAAATTCAGCATCTCGATCATGCTTTCTTGGAGAGATTCAAATGATAAGGAGGATATTCTGAAATGAATCGGCTGCGAACGTAAGCTGGTTAGGGTTTCTTTATTAATTCATGCTGGAATCGAGATAGATCGGTAGGATCGCGATGGGTTTGGATTATTACGATATCTTGAAAGTGGACAAAAACGCGACGGATGACGATCTCAAGAAATGCTACAAGAAATTGGCGATGAAATGGCATCCCGATAAGAATCCTTCGAACAAGAAGGAGGCCGAGGCTGCATTTAAACAGATCTCCGAAGCTTATGAGGTTTTGAGTGACCCCCAGAAAAGGGCAGTATATGACCAGTATGGAGAAGAAGGGCTAAAGGGAATCCCCCCTTCAGGTTCTACCAGTGGCAGCACAAATAGTTCTTATAATTCTTGCTTCAATCCTCGGAATGCAGAGGACATTTTTGCTGAGTTTTTTGGAAGCAGCCCATATGAATTCGGTCCAACAAGCCGTGCAAAATCAACCAGGTTTCGTTCGGGTGGGACCGGAGGATTCTTTGGCAGGTTTCCAGGTCCTGACGGCGTCCCCCGTTCTCACGGTGAAGCCCAACCGAAGAAAGCCCCCGCTGTCGAGACCAAATTGACTTGCAGCTTGGAGGAGCTTTATATGGGTTCAACGAAAAAAATGAAGGTCTCCAGAAATGCAGACAAAAATAAGGGGCAGCCGGATTCCGAGATCCTAACAATCGACGTGAGACCCGGATGGAAGAAGGGAACGAAGATCACATTTCCTGAGAAGGGAAAGAACGAGCAGTCGAACCAAATTCCGGCGGACCTCATCTTTGTGATCGACGAGAAGCCTCACAAGGTGTACAAGAGGGACGGAAATGATCTTGTGACCCATTATCAGGTCTCATTGGCAGAAGCTCTCACAGGAACCACAGTGAAGCTTGTTTCTCTTGATGGAAGGGATTTAAGTATGCCAATCACGGATACAATAGTCCCTGGGTTTGTGCTCATTGTAGAGGGAGAAGGAATGCCCATCGCAAAGGAGCCTGGAAGGAAGGGTAACTTGAGGATCAAGTTTGAGGTCAAATTTCCCACAAGGCTACATGCCGAGCAGAAATCAGCCCTCAGGACGATCCTGGGTGGTTGATTTTGTGTTTTTATTATTGTTTATGAGATTAACTGAGATGGCTATTTGTTCTTCCTTGGTTGTTTTTATGTGATCATGTGAAGGAATTTAGTTGCTTGACCCAAGAATTATTGATGTCACATTTTTTCTCCATTAGGCGCAATCAATATTTGGCTATAATTTTCTCTTTGTTGATGAGCAGGCAGCAGCATCTGAAGTTTAAAACTAGAATTAG

Network for GWHGAAEX001189

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00226.30	DnaJ	4	67	3.40E-27
PF01556.17	DnaJ_C	159	316	4.80E-42

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006457	Biological Process	protein folding
GO:0051082	Molecular Function	unfolded protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.190
SRP064423	SRR2545915	Juvenile tuber	3.430
SRP108465	SRR5643513	five period of Gastrodia elata	1.110
	SRR5643514	five period of Gastrodia elata	2.200
	SRR5643515	five period of Gastrodia elata	2.750
	SRR5643524	five period of Gastrodia elata	2.090
	SRR5643525	five period of Gastrodia elata	11.710
	SRR5643528	five period of Gastrodia elata	19.680
	SRR5643658	five period of Gastrodia elata	5.330
	SRR5643659	five period of Gastrodia elata	1.430
	SRR5643660	five period of Gastrodia elata	0.430
	SRR5643661	five period of Gastrodia elata	0.660
	SRR5643662	five period of Gastrodia elata	4.310
	SRR5643663	five period of Gastrodia elata	4.220
	SRR5643664	five period of Gastrodia elata	3.240
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.230
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.480
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.980
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.380
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.240
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.820
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.660
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.280
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.220
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.670
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.050
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.050
SRP279888	Gastro	Gastrodia elata tuber	3.07
	Juven	Juvenile tuber	0.53
	Mother_Gastro	Mother tuber of Gastrodia elata	43.71
	Mother_Juven	Mother tuber of Juvenile	10.23