Detail information of GWHGAAEX001195/evm.TU.scaffold_107.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720019285|ref|XP_010262040.1|2.07E-26PREDICTED: uncharacterized protein LOC104600664 [Nelumbo nucifera]
trEMBLtr|I1KG94|I1KG94_SOYBN2.00E-26Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G00960.1}
TAIRAT5G119704.00E-21Protein of unknown function (DUF3511)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000106956208973022-
Transcript Sequence

Network for GWHGAAEX001195

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12023.7DUF3511581011.50E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms164.000
SRR2545915Juvenile tuber152.200
SRP108465SRR5643513five period of Gastrodia elata56.990
SRR5643514five period of Gastrodia elata57.870
SRR5643515five period of Gastrodia elata55.300
SRR5643524five period of Gastrodia elata63.560
SRR5643525five period of Gastrodia elata188.000
SRR5643528five period of Gastrodia elata197.370
SRR5643658five period of Gastrodia elata239.970
SRR5643659five period of Gastrodia elata98.490
SRR5643660five period of Gastrodia elata99.170
SRR5643661five period of Gastrodia elata96.420
SRR5643662five period of Gastrodia elata58.470
SRR5643663five period of Gastrodia elata72.660
SRR5643664five period of Gastrodia elata73.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_146.480
SRR6049655Rhizomagastrodiae_C368-T10_good_116.900
SRR6049656Rhizomagastrodiae_C368-T07_good_141.150
SRR6049657Rhizomagastrodiae_C368-T07_good_148.310
SRR6049658Rhizomagastrodiae_C368-T04_good_142.350
SRR6049659Rhizomagastrodiae_C368-T04_good_147.770
SRR6049660Rhizomagastrodiae_C368-T01_good_145.830
SRR6049661Rhizomagastrodiae_C368-T04_good_149.740
SRR6049662Rhizomagastrodiae_C368-T01_good_142.850
SRR6049663Rhizomagastrodiae_C368-T01_good_142.780
SRR6049664Rhizomagastrodiae_C368-T10_good_133.250
SRR6049665Rhizomagastrodiae_C368-T10_good_133.250
SRP279888GastroGastrodia elata tuber 118.98
JuvenJuvenile tuber48.54
Mother_GastroMother tuber of Gastrodia elata 75.05
Mother_JuvenMother tuber of Juvenile 51.60