Detail information of GWHGAAEX001196/evm.TU.scaffold_107.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743756267|ref|XP_010915933.1|0PREDICTED: uncharacterized protein LOC105040886 [Elaeis guineensis]
trEMBLtr|M0SKH9|M0SKH9_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P02620_001}
TAIRAT1G282400Protein of unknown function (DUF616)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010611208891141403+
Transcript Sequence

Network for GWHGAAEX001196

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04765.12DUF6162095223.80E-149
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGTnc

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.370
SRR2545915Juvenile tuber14.350
SRP108465SRR5643513five period of Gastrodia elata17.030
SRR5643514five period of Gastrodia elata14.360
SRR5643515five period of Gastrodia elata16.370
SRR5643524five period of Gastrodia elata16.500
SRR5643525five period of Gastrodia elata20.270
SRR5643528five period of Gastrodia elata18.100
SRR5643658five period of Gastrodia elata22.120
SRR5643659five period of Gastrodia elata19.620
SRR5643660five period of Gastrodia elata16.540
SRR5643661five period of Gastrodia elata16.640
SRR5643662five period of Gastrodia elata17.710
SRR5643663five period of Gastrodia elata17.510
SRR5643664five period of Gastrodia elata16.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.630
SRR6049655Rhizomagastrodiae_C368-T10_good_117.260
SRR6049656Rhizomagastrodiae_C368-T07_good_118.010
SRR6049657Rhizomagastrodiae_C368-T07_good_114.930
SRR6049658Rhizomagastrodiae_C368-T04_good_116.730
SRR6049659Rhizomagastrodiae_C368-T04_good_115.420
SRR6049660Rhizomagastrodiae_C368-T01_good_115.550
SRR6049661Rhizomagastrodiae_C368-T04_good_115.460
SRR6049662Rhizomagastrodiae_C368-T01_good_118.300
SRR6049663Rhizomagastrodiae_C368-T01_good_117.380
SRR6049664Rhizomagastrodiae_C368-T10_good_120.060
SRR6049665Rhizomagastrodiae_C368-T10_good_120.060
SRP279888GastroGastrodia elata tuber 17.09
JuvenJuvenile tuber13.68
Mother_GastroMother tuber of Gastrodia elata 29.16
Mother_JuvenMother tuber of Juvenile 23.47