Detail information of GWHGAAEX001197/evm.TU.scaffold_107.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672169164|ref|XP_008804605.1|0PREDICTED: golgin-84 isoform X2 [Phoenix dactylifera]
Swissprottr|Q5JLY8|GOGA5_ORYSJ0Golgin-84
trEMBLtr|A0A067KFJ6|A0A067KFJ6_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP33733.1}
TAIRAT2G199500golgin candidate 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010613425421428428+
Transcript Sequence

Network for GWHGAAEX001197

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09787.8Golgin_A54857431.90E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007030Biological ProcessGolgi organization

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.460
SRR2545915Juvenile tuber13.300
SRP108465SRR5643513five period of Gastrodia elata13.570
SRR5643514five period of Gastrodia elata13.320
SRR5643515five period of Gastrodia elata12.490
SRR5643524five period of Gastrodia elata12.990
SRR5643525five period of Gastrodia elata8.330
SRR5643528five period of Gastrodia elata9.230
SRR5643658five period of Gastrodia elata9.170
SRR5643659five period of Gastrodia elata10.430
SRR5643660five period of Gastrodia elata9.850
SRR5643661five period of Gastrodia elata10.370
SRR5643662five period of Gastrodia elata10.810
SRR5643663five period of Gastrodia elata12.370
SRR5643664five period of Gastrodia elata11.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.510
SRR6049655Rhizomagastrodiae_C368-T10_good_111.410
SRR6049656Rhizomagastrodiae_C368-T07_good_113.560
SRR6049657Rhizomagastrodiae_C368-T07_good_19.190
SRR6049658Rhizomagastrodiae_C368-T04_good_112.730
SRR6049659Rhizomagastrodiae_C368-T04_good_111.140
SRR6049660Rhizomagastrodiae_C368-T01_good_110.640
SRR6049661Rhizomagastrodiae_C368-T04_good_110.820
SRR6049662Rhizomagastrodiae_C368-T01_good_113.630
SRR6049663Rhizomagastrodiae_C368-T01_good_112.930
SRR6049664Rhizomagastrodiae_C368-T10_good_113.870
SRR6049665Rhizomagastrodiae_C368-T10_good_113.870
SRP279888GastroGastrodia elata tuber 18.86
JuvenJuvenile tuber22.53
Mother_GastroMother tuber of Gastrodia elata 29.37
Mother_JuvenMother tuber of Juvenile 30.44