Gene detail

Detail information of GWHGAAEX001202/evm.TU.scaffold_107.29

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG3136	4.00E-60	Uncharacterized conserved protein
nr	gi\|672111301\|ref\|XP_008800023.1\|	4.01E-74	PREDICTED: uncharacterized protein LOC103714522 [Phoenix dactylifera]
trEMBL	tr\|M0T6E7\|M0T6E7_MUSAM	2.00E-74	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P12490_001}
TAIR	AT3G59390	4.00E-60	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000106	1574614	1595600	-

Transcript Sequence
>GWHTAAEX001202 CTATAAATTTTCTTGAAAATTCTTGAAGTCTGAGATAGGCTCAATGGGTCAAGTGCTCGGGCTCGTCTTCGGCCTCGACGTCATTTTAGGCATCCTCGGTGCTCTATACTTCTGCAGTCTCCCCCGGAAGATCGATGGAATCCGGAAGGACGTAGGTTTTCCTAATAATATCAAGTGCAGGAATACTGTACAAGGGCGTTATTTGCTGGCAGATAATAATGGTTATGTTTGTACAGCACATTCTGTTTTCCATTGGACTCGTTGCTGCCCAGAAAAAGGAGAAAGGTTTTCCTGTCAGGGTTGCAACCTCGTTTCCAAGTGTTGTAATTCGTACGAGTATTGCGTCTCATGCTGCTTAAATCCATCCATGACACGTGAAGACGCTGTACTAAGTTTGAAGATAGGCAAGCCAGCAACTGCTGGTACTTACTCAAATGCTTTTGATTTCTGTGTTGGAAGATGTCGTCATAGTTCTGCTAGTGTGGTTCATGAGAATGCCTATGCTAGTGATTTCCATCACTGCTACTCCTTGCAAGCAAATTCTTCAGGCTGGAAAACTATGTGAGATGCAAAGGATCATGTTTTGCTAGTGTGGGAGCTGGCCAACCCGCTAGAGTGGTGTAAAATGCTCCCAAAAATATGATATACGAGGATCTAAATACTTTGGGAGCTTGAAGGACCTGATTGGCGTAGCTTTTTTGCTGCTGGCTAGATAGCTTCCTGTACATTATTTGGGAGTAACTTTTATATTGCTTGACGGGCCAAAGCTTCATAGGAAGCAAAAATTGCTGTGCTTTATGTTAGTTTTACTTTTATCATAAAAGGTAGTCTTTATCACTTGCCTTTTACCATCATGGATCCGCTCTTGCTTGTGGATCACCTTCTTGCTGGCCGCTTATTGGTTGCTGCAGGTGCCATCAACATTTGGAAGCTTTCTCACTAGCAGCTTCAACTTTATAGGAGCTATTGATCAGCTTCCTCTCCAATAGCTAGTTCTCTAGTAGATTATAGATTTCAAGTATACTATCAACTGCTGGTTGCTTTAAACCTGTTATGTTAAACCAAACCTGAAAGCTGAACTTTTAAATTTTCTTCATATTCTTGACTAATCCCAACAATCACATGAGGCAGCTAGTCCCAATAATTACAAGCAGTAGACCCTGTAATACTCGATAATGATTATCTTAACTAAAACAAGCATCCTTTTAAGAAATAGTCTTAATTAGAAAGTTTATATTAGTCAGAAAGAGTTATTATCATAATGAGTTATTTCTCGAAATGGTTCCCGAACTATTGAAAAAATATTGATTTAGTCCCTCAACTATTAAAATACTAAAAATAGTCCACCAACTATTTCTAAAATTTTAAATAGTCCCTTTTTTCCATCAGCTTACCATCAATTTTCCGGAGCAAAGATGGAAATTTGATTTTAAATTACTAATGAAGGCTGCTACGTCTTTATTCTTTTCTTGTAGCGTCTTGGGAGTTCTTCCTTCACTTTTCCTGTGACTTTTCTTTGCGATCCACTTTTGCGGGCGACTCTAGGTGGCCTCCTTTGCAACTCTCAGCGACCTCATTCGCGACTCTCAGCGACCCAAGCTCCTCTGTGAATTTGTCTGCGACTCTGCAAGCTTCATTTGCAACCTCTACAACGTTATTCAAAACTCTTAGTAGCCCGTGTTCTTTTACAACCTCGCATGCATTCAGCGTGCTTCATTTGTGGCTTCTGTGAGCTTCATCTTGTGACCTCTGTGATGTCATCGTGAATCTCAGCGACCCAACATCCTCTGTTGTCTAGCCAATTGCAACTGTATTGCATGTAAATTTTGGTTTTATGTGTTTCGATTATAGAGTGCTATTTCTATTCTAGACTGTACGAAACCTTTGGCTGCATGTGTTTCTATTCAATTATGTGTTTTTATTCTTTCATGAATTTCATATTTGAGTTGTCAGGTGCTGTTTGCAACAAAAAAATTTTCCTACTATAAATCATCTAGATTGCTGATTTTTGATAGTGGTGGTGGGTAAAATGGAAACACATCTATCTTATTATAAATCATCTAGACTGCTGATTTTTGTTCTCATGAATTACTGACAATGGTGCTATAATAATTATGACATTGTTGGAAGTTGATTAAATCAATGAAAAATAGTCTTATGTGGAATTTCTTAATTGAATTTTTCATTTTTGTCTAGTCAAGATATCTTTGAACATTAAGTGATGTACTATCTTACAAATTTCTGCATATATAGATCAAGTGAGAAATGAGCAAAAATTTTTTGACCAACTTTATTGAATGTGATTCAGAAGAGCAATTGATCGTGCCACTAGTCTTGATAAGAGTTTTTGAATTAAGAATATTTACTTACATTATGTTTTTAAGTATTTGTTTAATTATATGCTAGAGCTACATGATAATTATGATTACAATTTTGATGATGATTATCAAGATTTTATTGAAATTGATAATGTGTTGAGAGGAAATGATGAGATAGAAGAGATAAATGAGGACAATGTGAGAGCTAAAAGAAAAAGGCAAGGAACAAATGCATTTTTCAAAAGCTTTATTGATTACAATACAAAAAAATATCATGAAATTGATTGTATGGAATTCAGTGATGGTGCTAGTGTCTACAGTAGTTATGAGGATAACAAATTGAGTTGGCCAGTCTACTCAACCAACATGAAAAATATTGAATTTAAAATTGGGATGGTTTTTAATACAAAAGACAAGTTCAATGAAGCTACCAAAAATCATCTATTTCAATGGTAAAATCAATAAGGTTTTCCAAAAATTATAGTAGAAGATGTAAGGCTATTTTTCATAGAGATAATTGTCCTTATTTTGTGTACGTTTCAAAAC

Network for GWHGAAEX001202

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10218.8	DUF2054	42	161	1.10E-34

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.040
SRP064423	SRR2545915	Juvenile tuber	6.980
SRP108465	SRR5643513	five period of Gastrodia elata	5.700
	SRR5643514	five period of Gastrodia elata	4.980
	SRR5643515	five period of Gastrodia elata	4.800
	SRR5643524	five period of Gastrodia elata	6.680
	SRR5643525	five period of Gastrodia elata	4.840
	SRR5643528	five period of Gastrodia elata	3.710
	SRR5643658	five period of Gastrodia elata	4.860
	SRR5643659	five period of Gastrodia elata	5.560
	SRR5643660	five period of Gastrodia elata	6.300
	SRR5643661	five period of Gastrodia elata	6.670
	SRR5643662	five period of Gastrodia elata	6.120
	SRR5643663	five period of Gastrodia elata	5.530
	SRR5643664	five period of Gastrodia elata	5.960
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.540
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.950
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.660
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.120
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.980
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.900
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.460
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.790
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.860
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	7.190
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.590
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.590
SRP279888	Gastro	Gastrodia elata tuber	6.97
	Juven	Juvenile tuber	8.98
	Mother_Gastro	Mother tuber of Gastrodia elata	8.54
	Mother_Juven	Mother tuber of Juvenile	9.48