Detail information of GWHGAAEX001203/evm.TU.scaffold_107.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG39727.00E-19Predicted membrane protein
nrgi|357141863|ref|XP_003572373.1|3.02E-124PREDICTED: gamma-secretase subunit APH1-like [Brachypodium distachyon]
Swissprottr|Q8L9G7|APH1_ARATH7.00E-117Gamma-secretase subunit APH1-like
trEMBLtr|I1HZG3|I1HZG3_BRADI1.00E-124Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI3G10110.1}
TAIRHS137752247.00E-19Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010615960041617509+
Transcript Sequence

Network for GWHGAAEX001203

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06105.11Aph-122401.50E-62
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06172APH1A Notch signaling pathway map04330

Gene Ontology

GO term OntologyName
GO:0043085Biological Processpositive regulation of catalytic activity
GO:0016485Biological Processprotein processing
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.350
SRR2545915Juvenile tuber18.640
SRP108465SRR5643513five period of Gastrodia elata16.190
SRR5643514five period of Gastrodia elata20.870
SRR5643515five period of Gastrodia elata16.190
SRR5643524five period of Gastrodia elata20.930
SRR5643525five period of Gastrodia elata21.050
SRR5643528five period of Gastrodia elata19.640
SRR5643658five period of Gastrodia elata19.270
SRR5643659five period of Gastrodia elata10.780
SRR5643660five period of Gastrodia elata7.920
SRR5643661five period of Gastrodia elata9.950
SRR5643662five period of Gastrodia elata11.310
SRR5643663five period of Gastrodia elata11.200
SRR5643664five period of Gastrodia elata9.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.970
SRR6049655Rhizomagastrodiae_C368-T10_good_120.930
SRR6049656Rhizomagastrodiae_C368-T07_good_125.130
SRR6049657Rhizomagastrodiae_C368-T07_good_119.190
SRR6049658Rhizomagastrodiae_C368-T04_good_126.560
SRR6049659Rhizomagastrodiae_C368-T04_good_131.130
SRR6049660Rhizomagastrodiae_C368-T01_good_120.360
SRR6049661Rhizomagastrodiae_C368-T04_good_121.710
SRR6049662Rhizomagastrodiae_C368-T01_good_127.360
SRR6049663Rhizomagastrodiae_C368-T01_good_121.580
SRR6049664Rhizomagastrodiae_C368-T10_good_126.880
SRR6049665Rhizomagastrodiae_C368-T10_good_126.880
SRP279888GastroGastrodia elata tuber 13.58
JuvenJuvenile tuber11.45
Mother_GastroMother tuber of Gastrodia elata 33.61
Mother_JuvenMother tuber of Juvenile 21.86