Gene detail

Detail information of GWHGAAEX001211/evm.TU.scaffold_107.40

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000106	1926007	1928998	+

Transcript Sequence
>GWHTAAEX001211 AGATTGGCATTGTTGAGTAGAGTTCTGATGGACTATATTAGATGGTGATGTTTTCTATCAGCAATGTCGTTTTGTTGTGGTGTTGTAAAGAGATGAGATTTGATGACGAGGGTTGGTTTGTTGTAAGAAGTTAGTAAGGGTGCTATTGCAATCTTCACGACCACCGCCGGTGCGAAGCATTTTGATTTGGCGTTGGAGCTGTCTTTCAATGAATCGTGATGGTTAGTTAAATGAATAAATTTGTTGTTTCATTGGAAACCCAAACAAAGCGAGAGTATCATCGATGAAAGACAAATTATTGATAGCCTTCATTTGATAAATTGGGGATTGAACCCCATGCATCATAATGAATTAATTCTAGTTATTGATAACAATGACTTTTAGAAGCAGAGAAAGACAATTTATAATATTTATTCATGATACTGATGACAATATGTGTAGTTGCTGCAATCAAAGATATTAGGATGCTGATTGGTCAAGAGTTGCTGAATAGGGGCGGTTAGGTGACCCAATCGTTGATGCCAAAGGGCTGAATTGAGTGAGGCAGTCGATGAGGCTAGTAGTAGTTGTTCGTGAGAAGGTGGAGGCTCGGGTTGGATGAAGTGGAGTCCGTTACAGCTGCGGCTTTGAAGGAGGGCTGTATTGGAGCAAGGGTCCTAGGTAGAGAAGCCAGCATGATCAACTGTAATAGAACAGTTATTATCTGTAGCAAGTTTATGGATATAAATAAGATTGAATTGAGATTGTGGTACGTGTAAGATTTGAGACAAAGCGAGCTTACGGGATAAAATGGGTAATAGGTCGTTACCAATGTTGAATATATGCAAGGATTGACTATTTCCGATGGTGACTTTGTCTAGACCATAATATGGATCTGAAATGGAGAGGTTACTACTATATGAGCTGATGCACCGGAATCTAGAAACAAATTGTTGTCAATTGGGCAGTTTGCAACGAATGCTATGGGGTGAAGAGTTTGTCTTGTAAATGATGTATCAAGTCGGTGCCAGCAGTTGAGGGTTGTGTGACCTCGTTAGTCGCAAATTTGACACTTCACGACTGCAAGGTGGGGGAGATGGTTCCGATTGTTTGCTGTTCTGGGAAGTGAACTTATCCAACCTTTTCCCCTTCATGGCTAGCCATGTCCTCGATCTCTGGCACGCAATGAGTGTGGGCTGCGTTTGTTATTGAAATTCACATCTTTCTTCATGTTGGAGGTTGATTTCTTCACTACAAAGCAAGGAACATAGGTAGTCGAGGCTTAGAAACTGAATGTTTGTTCTAACCGCAGTTTTGAAGGCTTGGTATTGAGCCGGGAGGCCGTTCAGCGCGTAGAGAATGCTGCCATCTGGATCAAGAGTGGAGCCGACAGCTGAAATTTTATCTACTATGTCTTTGATTTTTTATAGGTATGCTAGTATCGACTCATCTTGCATAGCAATGTTGTGGAGAGCGTTCTTGAGTTGAATTACTTTAGATCGATGTGTAGATTGGAGTCTTCTTTCAAGAATTTTCCAAGCATCCTTGTAGGTTTCGACATGAATGACATAGGGGAGAATTGATGGTGAGATAGTAGAATATAGTGTAGAAATGAGGTTTCTATCAGTGAAGCTTAATGCAATGGACAGAGGGTTGGGTATGAGGTTGTCGGCGCTGCCATGGGTGTGAAGAGGAGATTTTGCCGAGGAGCCGCTAAGTGGCCATGTGCACCATTTGTCGTAAATAGATTGAGGTATTTGTCGGTGGTGAGGAGGTTATTGAGTAGATTCCTGATATTGTTTATCAAGAATGTGAGAATGGAGGTGAGGGTGGGCTGTATTGTAGGTTCTTGGTGCTCTTGAACTTTGTTGCTGGTTTCCAGGCTGGAGGGTGAGAAGGCCATTGAGATTTCTTGAGGTTCTTGAATGTTGACAGGTGGTGGAAGATGAATGCTGCTGTTTAGAGGGTATCTGAAAATGTTCTTGGGAAGATTAGAGGAGGGAAGGCAGGGATGTTGCAGCGTCAGTAGAGGGGCTTGAAGTTGCGTGAGCAGAGGGGAGCTTTGATACCATCTAAGAATTGGAGAGACGAGAAGAAAGAACCGAGAGTGGAGAAAATAGCTTTTTCATTTAAGTACAATAATCGGTTTTATACATGGCTTTATAAATATATATATATATGGTGCATATCGTGATGTTGGCGGGTTCCGTGGGTTCTTGGATCGTCGAAGGCGATTCTAGGGCTAGAGTTGCCTCGGGACTGAAAGATCTTGTTCGGGCGGATCGTGATGTTGACGAATTCCCTCCACTTACTAAGGTTCATCATCCCCCTCTGAAAACTGGTAAAACTTTCTTGAACCCTTCTTCTTATTCTCCCAAGATTTCGTTGCCTTGTCATGGGGGAGGTTTCTCGATAGTTGGTCATTGCTTAAAAGGTTGGATCTCTTTGAACGCTTTGAATACCTTTCTTGATTCATTCTGTAAAGGTGGTTTTTGGATCAGATCGTTACCTAAAAATTATTTCTCTATATTCTTGGTTTCATTTGATGATTTTGTTGACTTGCTATCAAAGCGCTTTATTCGATTGCCTAAGGGTACTTTAAAAATCCGAGTGGGAAAGGATAAGTCTAGTGAGGTGCATTCCTTTTGTGAACCCCACTGGATCAGCTTTCCGCATCTTAGGCCGAAACTAAACAATCCGCTTCATCTTTGGGAATTAGCGAGTTCTATTGGGGCACCTATTGCAATAGATAAAAAATTTGGTTTCTGGCACGCCCCCCCGTGCTAGGGTTCTTATTAATTTGGATGTTTCTGGAAGATGCCCCAAGTATATCTTGATTACTGGCAATATTTTTGAACACAAACAAGCAATAGTAGTGGAACAGGAATATGTAAAATGTGCTTCTTGTTTTAGATGTGGGCATGTAAAGGAAGAGTGTAAGCCGAAATCAAAGAGGGTTTGAGTGCACACCCAATCTCACGAATTAAGATTAAGGCAAATCCTATTGAGTGAA

Network for GWHGAAEX001211

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14111.5	DUF4283	77	192	3.50E-09

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.170
SRP064423	SRR2545915	Juvenile tuber	0.140
SRP108465	SRR5643513	five period of Gastrodia elata	0.280
	SRR5643514	five period of Gastrodia elata	0.430
	SRR5643515	five period of Gastrodia elata	0.420
	SRR5643524	five period of Gastrodia elata	0.380
	SRR5643525	five period of Gastrodia elata	0.430
	SRR5643528	five period of Gastrodia elata	0.280
	SRR5643658	five period of Gastrodia elata	0.190
	SRR5643659	five period of Gastrodia elata	0.350
	SRR5643660	five period of Gastrodia elata	0.380
	SRR5643661	five period of Gastrodia elata	0.140
	SRR5643662	five period of Gastrodia elata	0.130
	SRR5643663	five period of Gastrodia elata	0.710
	SRR5643664	five period of Gastrodia elata	0.380
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.230
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.460
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.320
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.210
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.120
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.020
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.140
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.270
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.080
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.080
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.150
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.150
SRP279888	Gastro	Gastrodia elata tuber	0.46
	Juven	Juvenile tuber	0.56
	Mother_Gastro	Mother tuber of Gastrodia elata	0.35
	Mother_Juven	Mother tuber of Juvenile	1.40