Detail information of GWHGAAEX001215/evm.TU.scaffold_107.49


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743765206|ref|XP_010912818.1|1.55E-55PREDICTED: uncharacterized protein LOC105038647 [Elaeis guineensis]
trEMBLtr|M0S5Q0|M0S5Q0_MUSAM8.00E-51Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P06590_001}
TAIRAT4G089102.00E-08Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010624348212435534+
Transcript Sequence

Network for GWHGAAEX001215

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.890
SRR2545915Juvenile tuber13.770
SRP108465SRR5643513five period of Gastrodia elata4.380
SRR5643514five period of Gastrodia elata1.260
SRR5643515five period of Gastrodia elata1.550
SRR5643524five period of Gastrodia elata1.870
SRR5643525five period of Gastrodia elata2.010
SRR5643528five period of Gastrodia elata3.190
SRR5643658five period of Gastrodia elata7.210
SRR5643659five period of Gastrodia elata3.030
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.940
SRR5643662five period of Gastrodia elata4.150
SRR5643663five period of Gastrodia elata4.110
SRR5643664five period of Gastrodia elata8.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.560
SRR6049655Rhizomagastrodiae_C368-T10_good_13.350
SRR6049656Rhizomagastrodiae_C368-T07_good_12.450
SRR6049657Rhizomagastrodiae_C368-T07_good_10.950
SRR6049658Rhizomagastrodiae_C368-T04_good_12.160
SRR6049659Rhizomagastrodiae_C368-T04_good_10.460
SRR6049660Rhizomagastrodiae_C368-T01_good_11.730
SRR6049661Rhizomagastrodiae_C368-T04_good_11.270
SRR6049662Rhizomagastrodiae_C368-T01_good_12.400
SRR6049663Rhizomagastrodiae_C368-T01_good_11.890
SRR6049664Rhizomagastrodiae_C368-T10_good_14.680
SRR6049665Rhizomagastrodiae_C368-T10_good_14.680
SRP279888GastroGastrodia elata tuber 2.68
JuvenJuvenile tuber0.19
Mother_GastroMother tuber of Gastrodia elata 1.97
Mother_JuvenMother tuber of Juvenile 0.67