Gene detail

Detail information of GWHGAAEX001224/evm.TU.scaffold_107.60

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672194091\|ref\|XP_008776203.1\|	8.25E-93	PREDICTED: uncharacterized protein LOC103696379 [Phoenix dactylifera]
trEMBL	tr\|M0RZM0\|M0RZM0_MUSAM	2.00E-71	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P13620_001}

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000106	2782245	2844028	-

Transcript Sequence
>GWHTAAEX001224 AAGAAATTAGAGTGATAATAAGCAATATTGAAAAAATAAATATTTTATGGAAAAGCATAAAAGTTTTTTCTTACACTAGTAAAATTCTGATATTGTAAGATTTTTGCAGGTGCTAGTAAATTGTTTCTCCCAAAAGTGGCCTAATCAGCCCCACCCGCACCACCTTCTTCCTCGCTACTCCCAGCGCCAGCACCCATAGATCTCGCTTGAAGTGCATCTATCCCACTTTGATTCGTAGAAGCCCTCGCCCAGAATCAGATTCTAGCCTCCTGCTGGGAAGGAAATTTTTTTTTTGTTGTTGTTGTGATTCTGCTCAAATTGCTCCGAAAAAACGTACAGAAATGCATTTCAGATTGGCAAAAAAAAATATTTTTTTTCCGTTTTAGCCCTAAGACGCGTTTTGGGCGCTTTATTTGATGAGCATAGCAGCGCCCTTATAATAAGAAGATGTTAAAGGTAGATGACTGAGGTATAGCTACAGTTTTTATTTCTGGAATAGTAACCTGATTCCCGACAGAGAAATAGAGATGAAACGGGGCGGCGTTTCTTTGCTGACGCTTTTTCTGATTCACGTGTTACTCTTCTTTGGTTTTGTGGCTGCGGAGGGCGATTCCAAGGGAATTCGAACGCCTAATACCAGCGGCCGTACTGTTGATTCAAGTGGTGCCGAAAATTCACCCCCTATTCGTGTCAAAGGAGACGAAGAGAAGAAGGATATAAATCAAGATGGAAAAGCTCAGCAGGAAACAACAACAAATCCACTCATTGACACGGAAAAGAATATGAGTGAGGGCGAAGATAAACATTTGGAGAAACCAAAGGCATCCAGTGGTCTAAGTAAGGAAAGTTTGGACGAGGGTTCAAGTAATAATAAGAAAACACCAATTGCTGATTCCCATGCAACGGGTTGTGACCCTTCTAACAGATGTATTGACAAGAAGACCAATTTGGTTGCTTGCCTGAGAGTCCCAGGAACTGATACGCAAGCTCTCTCCCTTGTTATTCAGAACAAAGGAAAAAATTCTCTTGACGTTAAAATCATCGCGCCATCTTTTGTGCATCTGGAGCAAGTTGATATTCATGTGAAGGCAGAAGGAGACAAAGAGGTTAAAATCAATGTAAATGAGGACAGTGCAAAAGACTCCATGATAATTCTGCAACCTGGAGGGGGCGATAATTGTAGCCTGGCCTTCAGGAACATTATCCCTAATAATTCCATAAGCAAAAGTGAGACATTCATCCTACCGAGATTCATTAGCGCATTCACAGGCTTCGCACTTGTGTGCATCGTCCTTACTGCGGCTGTGATCATGGGCATGGCCTGGCTATGCATTAAGTTTCGCCGGTTTCTGCCACAAGAAATCAGCCCAAAATACCAGAAATTAGAGGTTGGATTGCCGGTTTCGACTGGAGGAAAGAAGGAAGGCGATGACGGTGGTGATAACTGGGATATAAGCTGGGGAAATGGCTGGGACGAAGAAGATGCCCCAATGACCCCCTCGAAGACGGTTTCGAACCCGTCTCTGAAGGGTCTTGCCTCAAGGAGATTTAACAAAGATGGATGGAGAGACTAGAGAGTGCAGAAAGGCAACTTAAATTTGAGAAAAAAACTTGTGGGGAAATTTTGCTGTTCTCTGAATTCATCCTCTAATAAAATTGTATATTGTTTATGAGGCAGGCATAATGAATGGCACCTTTGTTGATTTTACACTGAATGTAATGCTTTTTCATTGAAATCTGCTCGATTGCCTTATTTAGGAGTGCAAAGCATTCTTCTCCATAGACTTTGTAATTTCATTTGCTATTTTCCATTTTTTATGTAAAGCATGAATTGTGTTTTTTTTTTTGTTCTTAGAAAAAAAGAGGACTGCGGCCAATACGAAGGCATGGGATTTTTATGAGGTAGGTATCTAGATTTTATAGGATTTCTTAATTACGTAGCTCCTGAAATTGTTTTTTCTTATTCCAAAATTAAGCTGGCTTAGGCTATATCTTTTTTTAGATTAAGGGAGATTAAAGGATTATTAGCAAAGCCCCCTTTGAGCTTTAGTGCACCCACCATCAATTTTCGCGTCTGAAATATTGATGTGAACATCGATTACCGTAAACCTCAGTGCTTAAGAATTAAATTAGGGAAAAGT

Network for GWHGAAEX001224

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	36.170
SRP064423	SRR2545915	Juvenile tuber	36.040
SRP108465	SRR5643513	five period of Gastrodia elata	46.460
	SRR5643514	five period of Gastrodia elata	43.360
	SRR5643515	five period of Gastrodia elata	43.180
	SRR5643524	five period of Gastrodia elata	42.180
	SRR5643525	five period of Gastrodia elata	43.970
	SRR5643528	five period of Gastrodia elata	36.690
	SRR5643658	five period of Gastrodia elata	37.000
	SRR5643659	five period of Gastrodia elata	36.140
	SRR5643660	five period of Gastrodia elata	31.650
	SRR5643661	five period of Gastrodia elata	32.130
	SRR5643662	five period of Gastrodia elata	31.810
	SRR5643663	five period of Gastrodia elata	37.180
	SRR5643664	five period of Gastrodia elata	28.180
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	33.240
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	42.690
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	34.430
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	33.530
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	27.800
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	31.020
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	32.040
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	29.130
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	29.420
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	28.610
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	38.140
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	38.140
SRP279888	Gastro	Gastrodia elata tuber	29.31
	Juven	Juvenile tuber	36.98
	Mother_Gastro	Mother tuber of Gastrodia elata	34.73
	Mother_Juven	Mother tuber of Juvenile	33.13